RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CYB561D1Q8N8Q1 229 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 IL1F10Q8WWZ1 152 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 WNK2Q9Y3S1 2297 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 A0A1B0GU03 582 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 CYSRT1A8MQ03 144 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 ITGB1BP1O14713 200 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 PHOX2AO14813 284 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 RAB4AP20338 218 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TAS2R30P59541 319 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.81
SCARB1-204ENST00000535005 CCL20P78556 96 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 OR52L2PQ8NGH6 319 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 OR10J5Q8NHC4 309 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TNFRSF14Q92956 283 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TOMM40LQ969M1 308 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 RHOVQ96L33 236 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 ABCA1O95477 2261 aa10.02□□□□□ -0.81
SCARB1-204ENST00000535005 ACANP16112 2415 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 IGSF23A1L1A6 192 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 SMAD7O15105 426 aaKnown RBP10.01□□□□□ -0.81
SCARB1-204ENST00000535005 TUSC2O75896 110 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 FABP4P15090 132 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 UCP1P25874 307 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 MORN2Q502X0 79 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF343Q6P1L6 599 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 FAM216AQ8WUB2 273 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 FRZBQ92765 325 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 ACY3Q96HD9 319 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 TBX15Q96SF7 602 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 NEU1Q99519 415 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 ATP5SQ99766 215 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 AGMATQ9BSE5 352 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 OR1A1Q9P1Q5 309 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 GNG12Q9UBI6 72 aa10.01□□□□□ -0.81
SCARB1-204ENST00000535005 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 A8MWP6 167 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 MPPED1O15442 326 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 TOX4O94842 621 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 IFNA1P01562 189 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 KRTAP1-1Q07627 177 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 HAGHQ16775 308 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 LTC4SQ16873 150 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 SP6Q3SY56 376 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 NCR3LG1Q68D85 454 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 CDPF1Q6NVV7 123 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 CMTM1Q8IZ96 169 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 SLC35G3Q8N808 338 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF439Q8NDP4 499 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF596Q8TC21 504 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 ABHD5Q8WTS1 349 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 PYGO2Q9BRQ0 406 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 CSPG4Q6UVK1 2322 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 IGHV3-43A0A0B4J1X8 118 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 CD5LO43866 347 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 IGHV3-43DP0DP04 118 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 BCL2P10415 239 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 SLC25A6P12236 298 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF16P17020 682 aaPredicted RBP10□□□□□ -0.81
SCARB1-204ENST00000535005 FAM53AQ6NSI3 398 aaPredicted RBP10□□□□□ -0.81
SCARB1-204ENST00000535005 VMO1Q7Z5L0 202 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 LINC00311Q8N616 119 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 OR11H6Q8NGC7 330 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
SCARB1-204ENST00000535005 VAX2Q9UIW0 290 aa10□□□□□ -0.81
SCARB1-204ENST00000535005 FAM24AA6NFZ4 105 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 PHLDA2Q53GA4 152 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 UTF1Q5T230 341 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 FAM90A2PQ658T7 463 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 ABHD12Q8N2K0 398 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 OR9G1Q8NH87 305 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 BTF3L4Q96K17 158 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 PCGF1Q9BSM1 259 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 PARD6GQ9BYG4 376 aaPredicted RBP9.99□□□□□ -0.81
SCARB1-204ENST00000535005 SDF2L1Q9HCN8 221 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 OR2W1Q9Y3N9 320 aa9.99□□□□□ -0.81
SCARB1-204ENST00000535005 IGHV2-26A0A0B4J1V2 119 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 PPP5D1E7EU14 171 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 IFNA5P01569 189 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 IGLV1-47P01700 117 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
SCARB1-204ENST00000535005 ID3Q02535 119 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 CT45A1Q5HYN5 189 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 SLC25A48Q6ZT89 311 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms