RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PAXXQ9BUH6 204 aa14.52□□□□□ -0.09
PHRF1-206ENST00000534320 SPCS1Q9Y6A9 102 aa14.52□□□□□ -0.09
PHRF1-206ENST00000534320 RTTNQ86VV8 2226 aa14.52□□□□□ -0.09
PHRF1-206ENST00000534320 PLPPR1Q8TBJ4 325 aa14.52□□□□□ -0.09
PHRF1-206ENST00000534320 F11RQ9Y624 299 aaKnown RBP14.52□□□□□ -0.09
PHRF1-206ENST00000534320 LDLRAD4O15165 306 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 CKS2P33552 79 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 HCP5Q6MZN7 132 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 ATOH7Q8N100 152 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 TMEM186Q96B77 213 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 DOCK8Q8NF50 2099 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 A8MXK9 166 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 HYPMO75409 117 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 APOBEC3AP31941 199 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-206ENST00000534320 MEF2CQ06413 473 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-206ENST00000534320 SPANXN1Q5VSR9 72 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 HOXA4Q00056 320 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-206ENST00000534320 SMAGPQ0VAQ4 97 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 ZCCHC14Q8WYQ9 949 aaKnown RBP14.51□□□□□ -0.09
PHRF1-206ENST00000534320 LINC00869P0C866 280 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 ECSCRQ19T08 205 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 FAM166AQ6J272 317 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 FAM222BQ8WU58 562 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 SIGMAR1Q99720 223 aa14.51□□□□□ -0.09
PHRF1-206ENST00000534320 QTRT1Q9BXR0 403 aaKnown RBP14.51□□□□□ -0.09
PHRF1-206ENST00000534320 TRBV6-7A0A0A0MS04 114 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 E9PQ18 207 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 SELENOTP62341 195 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 OR4C13Q8NGP0 309 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 HIGD1AQ9Y241 93 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1-12A0A0C4DH73 117 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1D-12P01611 117 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 MAS1LP35410 378 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 BSPH1Q075Z2 132 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 TMEM106BQ9NUM4 274 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 MAJINQ3KP22 176 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 NEUROG1Q92886 237 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 SCNM1Q9BWG6 230 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 CA1P00915 261 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-206ENST00000534320 DCTN5Q9BTE1 182 aa14.5□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1D-8A0A087WSZ0 117 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 TMSB15BA0A087X1C1 80 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 PRSS2P07478 247 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 RBPMS2Q6ZRY4 209 aaKnown RBP14.49□□□□□ -0.09
PHRF1-206ENST00000534320 FAM90A1Q86YD7 464 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 JKAMPQ9P055 326 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 B3GALT5-AS1P59052 145 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 ARF6P62330 175 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 FAM216BQ8N7L0 139 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 GRIFINA4D1Z8 144 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 LCN2P80188 198 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 PSMG4Q5JS54 123 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 ZNF788Q6ZQV5 615 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 GTF3AQ92664 365 aaKnown RBP14.49□□□□□ -0.09
PHRF1-206ENST00000534320 LAMTOR2Q9Y2Q5 125 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 KCNMB2Q9Y691 235 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 C17orf98A8MV24 154 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 NUDT11Q96G61 164 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 ANAPC13Q9BS18 74 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 TNFRSF19Q9NS68 423 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 TMEM56-RWDD3S4R434 201 aa14.49□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1D-13A0A0B4J2D9 117 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1-13P0DP09 117 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 SGK494Q96LW2 274 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 TMEM208Q9BTX3 173 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 TRAV24A0A0B4J272 114 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 ZNF146Q15072 292 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 PSMG3Q9BT73 122 aaPredicted RBP14.48□□□□□ -0.09
PHRF1-206ENST00000534320 MAP1LC3AQ9H492 121 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 C5orf63A6NC05 138 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 LGALS3P17931 250 aaKnown RBP14.48□□□□□ -0.09
PHRF1-206ENST00000534320 TTC9CQ8N5M4 171 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 NUP37Q8NFH4 326 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 RNF126Q9BV68 326 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 PRNTQ86SH4 94 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 CLEC7AQ9BXN2 247 aa14.48□□□□□ -0.09
PHRF1-206ENST00000534320 RND2P52198 227 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 LRRC75BQ2VPJ9 315 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 TEX29Q8N6K0 151 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 OR5R1Q8NH85 324 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 C14orf144Q96I85 54 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 MRPS16Q9Y3D3 137 aaKnown RBP14.47□□□□□ -0.09
PHRF1-206ENST00000534320 FANCMQ8IYD8 2048 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 LY6G6EA0A0G2JKS1 128 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 U3KQA8 63 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 TM4SF5O14894 197 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 C18orf12Q96KH6 178 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 IGKV1-27A0A075B6S5 117 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 KBTBD11-OT1A0A1B0GTJ5 212 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 PQLC2Q6ZP29 291 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 ST6GALNAC3Q8NDV1 305 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 MDS2Q8NDY4 140 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 MEGF9Q9H1U4 602 aa14.47□□□□□ -0.09
PHRF1-206ENST00000534320 TP53BP1Q12888 1972 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-206ENST00000534320 CLEC2AQ6UVW9 174 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 MRPL16Q9NX20 251 aaKnown RBP14.46□□□□□ -0.09
PHRF1-206ENST00000534320 DNASE2O00115 360 aaPredicted RBP14.46□□□□□ -0.09
PHRF1-206ENST00000534320 SNRPCP09234 159 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms