RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TOMM5Q8N4H5 51 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GDPD1Q8N9F7 314 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF565Q8N9K5 539 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 BEST4Q8NFU0 473 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 OR52B4Q8NGK2 314 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 OR5B3Q8NH48 314 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 COQ8AQ8NI60 647 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GIMAP1Q8WWP7 306 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ARL11Q969Q4 196 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SLC25A46Q96AG3 418 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 NARS2Q96I59 477 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ST6GAL2Q96JF0 529 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 C18orf15Q96N68 181 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SDHCQ99643 169 aaPredicted RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF251Q9BRH9 671 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SRSF8Q9BRL6 282 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 MRPL20Q9BYC9 149 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 NXF2Q9GZY0 626 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 MIXL1Q9H2W2 232 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ANKRD19PQ9H560 264 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 LINC00574Q9H8X3 128 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SEBOXQ9HB31 216 aaPredicted RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM138Q9NPI0 162 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 PLCXD1Q9NUJ7 323 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 NUDT15Q9NV35 164 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 FKBP14Q9NWM8 211 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 PEF1Q9UBV8 284 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 MLXQ9UH92 298 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 LAMP5Q9UJQ1 280 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GNG8Q9UK08 70 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 OR52A1Q9UKL2 312 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 DIMT1Q9UNQ2 313 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 FXYD6-FXYD2A0A087WZ82 144 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 IGHV4-28A0A0C4DH34 117 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 C2orf70A6NJV1 201 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 FAM25EA8MYX2 175 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 L7N2F9 121 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 VCYO14598 125 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 GOSR2O14653 212 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 NUPL2O15504 423 aaKnown RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SPINT2O43291 252 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 RPP14O95059 124 aaKnown RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 CA2P00918 260 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 IFNA7P01567 189 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 IFNGP01579 166 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 IGHV3-23P01764 117 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 HMGN1P05114 100 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 CSN2P05814 226 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 UCHL1P09936 223 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 TRAPPC2P0DI81 140 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 TRAPPC2BP0DI82 140 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 VPREB1P12018 145 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF3P17036 446 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ELK1P19419 428 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ANXA7P20073 488 aaKnown RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 AMTP48728 403 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 AKR1D1P51857 326 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 GBX2P52951 348 aaPredicted RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 BLVRAP53004 296 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 AP2S1P53680 142 aaPredicted RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ATP1B3P54709 279 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 XGP55808 180 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SNRPGP62308 76 aaKnown RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 HAMPP81172 84 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM267Q0VDI3 215 aaPredicted RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 PJVKQ0ZLH3 352 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 GPR176Q14439 515 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 RPEL1Q2QD12 228 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 PAN3Q58A45 887 aaKnown RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 Q5BKY6 102 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SPIN3Q5JUX0 258 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 Q5VSD8 79 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF660Q6AZW8 331 aaPredicted RBP2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF343Q6P1L6 599 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 FAM122CQ6P4D5 195 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 CD200R1LQ6Q8B3 271 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 C19orf35Q6ZS72 473 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 LINC00299Q6ZSB3 139 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SLC16A13Q7RTY0 426 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 FAM220AQ7Z4H9 259 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 APRG1Q8IVJ8 170 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 GID4Q8IVV7 300 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SERPINA12Q8IW75 414 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 SLC38A6Q8IZM9 456 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 TCTE3Q8IZS6 198 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 LINC00311Q8N616 119 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF439Q8NDP4 499 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 NPBQ8NG41 125 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR51T1Q8NGJ9 327 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR8J1Q8NGP2 316 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR13C5Q8NGS8 318 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR2K2Q8NGT1 345 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR10K1Q8NGX5 313 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR11H2Q8NH07 326 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR10AC1Q8NH08 325 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 OR1L1Q8NH94 360 aa2.13□□□□□ -2.07
CHMP4A-208ENST00000534106 LGALS14Q8TCE9 139 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms