RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	OR13C4	Q8NGS5	318 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	OR4C6	Q8NH72	309 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	CYGB	Q8WWM9	190 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	NARS2	Q96I59	477 aa	Known RBP	3.17	□□□□□ -1.9
ATM-223	ENST00000533979	KLF6	Q99612	283 aa	Predicted RBP	3.17	□□□□□ -1.9
ATM-223	ENST00000533979	CMSS1	Q9BQ75	279 aa	Known RBP	3.17	□□□□□ -1.9
ATM-223	ENST00000533979	GGTLC1	Q9BX51	225 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	MRO	Q9BYG7	248 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	ENY2	Q9NPA8	101 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	TNFRSF19	Q9NS68	423 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	TAS2R5	Q9NYW4	299 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	CALML5	Q9NZT1	146 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	OPTC	Q9UBM4	332 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	LSM5	Q9Y4Y9	91 aa	Known RBP	3.17	□□□□□ -1.9
ATM-223	ENST00000533979	WSB1	Q9Y6I7	421 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	DOPEY2	Q9Y3R5	2298 aa		3.17	□□□□□ -1.9
ATM-223	ENST00000533979	TRIP11	Q15643	1979 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	NAV3	Q8IVL0	2385 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	PLXNA4	Q9HCM2	1894 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	IGLV1-50	A0A075B6I6	118 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	TRAV8-3	A0A0A6YYJ7	113 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	C20orf202	A1L168	122 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	TMEM150B	A6NC51	233 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	BTNL10	A8MVZ5	291 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	GYG2	O15488	501 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	IFNA17	P01571	189 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	C8G	P07360	202 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	PRTN3	P24158	256 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	MIP	P30301	263 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	PIGP	P57054	158 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	MAX	P61244	160 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	NCALD	P61601	193 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	MEF2C	Q06413	473 aa	Predicted RBP	3.16	□□□□□ -1.9
ATM-223	ENST00000533979	CDK10	Q15131	360 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	IL17A	Q16552	155 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	LINC00303	Q3SY05	128 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	C1orf195	Q5TG92	126 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	TOMM20L	Q6UXN7	152 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	RASSF6	Q6ZTQ3	369 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	C6orf120	Q7Z4R8	191 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	CD177	Q8N6Q3	437 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	OR4M1	Q8NGD0	313 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	OR10D3	Q8NH80	312 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	OR1L1	Q8NH94	360 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	TERB2	Q8NHR7	220 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	GNPDA2	Q8TDQ7	276 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	C15orf40	Q8WUR7	153 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	RDH5	Q92781	318 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	FXYD5	Q96DB9	178 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	SLC35E1	Q96K37	410 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	LINC01587	Q99440	93 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	GINS3	Q9BRX5	216 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	LXN	Q9BS40	222 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.16	□□□□□ -1.9
ATM-223	ENST00000533979	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.16	□□□□□ -1.9
ATM-223	ENST00000533979	EBPL	Q9BY08	206 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	PARP11	Q9NR21	331 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	DHCR7	Q9UBM7	475 aa	Known RBP	3.16	□□□□□ -1.9
ATM-223	ENST00000533979	LRRK2	Q5S007	2527 aa		3.16	□□□□□ -1.9
ATM-223	ENST00000533979	URB1	O60287	2271 aa	Known RBP	3.16	□□□□□ -1.9
ATM-223	ENST00000533979		A0A087WUJ7	227 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	IGHV5-51	A0A0C4DH38	117 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979		A0A0U1RQV1	116 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	LINC00862	A6NCI5	91 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	LEUTX	A8MZ59	168 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979		F6UZH7	168 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979		H3BSA7	217 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979		M0R143	59 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	GCM2	O75603	506 aa	Predicted RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	ARL6IP5	O75915	188 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR7C1	O76099	320 aa	Predicted RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR2A4	O95047	310 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	SLC25A14	O95258	325 aa	Predicted RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	SULT1A3	P0DMM9	295 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	SULT1A4	P0DMN0	295 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	HLA-E	P13747	358 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	MYL12A	P19105	171 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	EVX1	P49640	407 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	RHOB	P62745	196 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	PPP3R1	P63098	170 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	C1D	Q13901	141 aa	Known RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	MPV17L2	Q567V2	206 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	TMEM78	Q5T7P6	136 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	DCUN1D2	Q6PH85	259 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	CLEC20A	Q6ZU45	233 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	SLC25A45	Q8N413	288 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	ZIC4	Q8N9L1	334 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	DCAF4L2	Q8NA75	395 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR4D11	Q8NGI4	311 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	LINC01006	Q8NI28	216 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	ORAOV1	Q8WV07	137 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	ACOT12	Q8WYK0	555 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	TMEM158	Q8WZ71	300 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR2A7	Q96R45	310 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR51I1	Q9H343	314 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	OR52D1	Q9H346	318 aa		3.15	□□□□□ -1.91
ATM-223	ENST00000533979	RPP21	Q9H633	154 aa	Known RBP	3.15	□□□□□ -1.91
ATM-223	ENST00000533979	NOX3	Q9HBY0	568 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms