RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 VCX3AQ9NNX9 186 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 NDUFA4L2Q9NRX3 87 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 EXTL2Q9UBQ6 330 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 DPPA5A6NC42 116 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 MARCH11A6NNE9 402 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 GPR31O00270 319 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
SSBP3-215ENST00000533946 IGKV1-5P01602 117 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 ADMP35318 185 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 MAS1LP35410 378 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 ARL3P36405 182 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 KIR2DS2P43631 304 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 RORCP51449 518 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 PPP5CP53041 499 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 HAGHQ16775 308 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 LHFPL1Q86WI0 220 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 CLVS1Q8IUQ0 354 aaPredicted RBP7.24□□□□□ -1.25
SSBP3-215ENST00000533946 OR6F1Q8NGZ6 308 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 KCTD12Q96CX2 325 aaKnown RBP7.24□□□□□ -1.25
SSBP3-215ENST00000533946 CITED4Q96RK1 184 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 TP53RKQ96S44 253 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 TM2D3Q9BRN9 247 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 QTRT1Q9BXR0 403 aaKnown RBP7.24□□□□□ -1.25
SSBP3-215ENST00000533946 PRR13Q9NZ81 148 aa7.24□□□□□ -1.25
SSBP3-215ENST00000533946 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
SSBP3-215ENST00000533946 ZNF320A2RRD8 509 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 OR2T8A6NH00 312 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 K7EIM0 57 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 SERPINE2P07093 398 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-215ENST00000533946 TRAPPC2P0DI81 140 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 TRAPPC2BP0DI82 140 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 ZNF182P17025 639 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-215ENST00000533946 CBLN1P23435 193 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 TAS2R46P59540 309 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 TSPAN5P62079 268 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 CATR1Q13166 79 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 MLANAQ16655 118 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 ZFAND6Q6FIF0 208 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 LINC00322Q6ZN03 302 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-215ENST00000533946 Q6ZRM9 215 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 VSTM2AQ8TAG5 236 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 DYNC2LI1Q8TCX1 351 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 MRPL36Q9P0J6 103 aaKnown RBP7.23□□□□□ -1.25
SSBP3-215ENST00000533946 OR51B2Q9Y5P1 312 aa7.23□□□□□ -1.25
SSBP3-215ENST00000533946 IGHV3-49A0A0A0MS15 119 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 A0A0B4J293 547 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 GGCTO75223 188 aaKnown RBP7.22□□□□□ -1.25
SSBP3-215ENST00000533946 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
SSBP3-215ENST00000533946 P0C879 139 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 DEFA4P12838 97 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 RCVRNP35243 200 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 CD81P60033 236 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 GUCA2BQ16661 112 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 SLC25A24Q6NUK1 477 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 BTNL8Q6UX41 500 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 GPR141Q7Z602 305 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 GPHB5Q86YW7 130 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 UXS1Q8NBZ7 420 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 OR4A5Q8NH83 315 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 LHFPL5Q8TAF8 219 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 MARCH1Q8TCQ1 289 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 MRPS26Q9BYN8 205 aaKnown RBP7.22□□□□□ -1.25
SSBP3-215ENST00000533946 COMMD5Q9GZQ3 224 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 TMEM14BQ9NUH8 114 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 SIGLEC8Q9NYZ4 499 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 COMMD9Q9P000 198 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 MTFP1Q9UDX5 166 aa7.22□□□□□ -1.25
SSBP3-215ENST00000533946 SMIM31A0A1B0GVY4 71 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 TMEM127O75204 238 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 ZNF124Q15973 351 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 LILRB2Q8N423 598 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 GDPD1Q8N9F7 314 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 OR1L8Q8NGR8 309 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 OR13C8Q8NGS7 320 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 EEF1AKMT3Q96AZ1 226 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 CMTM3Q96MX0 182 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 NEURL2Q9BR09 285 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 RTBDNQ9BSG5 229 aaPredicted RBP7.21□□□□□ -1.26
SSBP3-215ENST00000533946 EDA2RQ9HAV5 297 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 SCPEP1Q9HB40 452 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 ZMAT5Q9UDW3 170 aaKnown RBP7.21□□□□□ -1.26
SSBP3-215ENST00000533946 F11RQ9Y624 299 aaKnown RBP7.21□□□□□ -1.26
SSBP3-215ENST00000533946 ALMS1Q8TCU4 4167 aa7.21□□□□□ -1.26
SSBP3-215ENST00000533946 IGHV3OR16-13A0A075B7E8 117 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 IGHV3-74A0A0B4J1X5 117 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 A8MZ25 164 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 H3BMQ9 156 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 I3L2K1 104 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 LGALS9O00182 355 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 TGOLN2O43493 480 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 CREBL2O60519 120 aaPredicted RBP7.2□□□□□ -1.26
SSBP3-215ENST00000533946 APOHP02749 345 aaPredicted RBP7.2□□□□□ -1.26
SSBP3-215ENST00000533946 CD74P04233 296 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 PGAM2P15259 253 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 PTBP1P26599 531 aaKnown RBP eCLIP7.2□□□□□ -1.261e-6■■■■□ 23.1
SSBP3-215ENST00000533946 UCP3P55916 312 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms