RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CGAP01215 116 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 MT-ND6P03923 174 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 ZNF705AQ6ZN79 300 aaPredicted RBP13.66□□□□□ -0.22
CTSB-228ENST00000533455 MIR17HGQ75NE6 70 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 GCSAMQ8N6F7 178 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 IDI2-AS1Q9NZ38 188 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 SLC45A2Q9UMX9 530 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 TECTAO75443 2155 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 CD59P13987 128 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 CD33P20138 364 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 COMPP49747 757 aaPredicted RBP13.65□□□□□ -0.22
CTSB-228ENST00000533455 RPL19P84098 196 aaKnown RBP13.65□□□□□ -0.22
CTSB-228ENST00000533455 COX19Q49B96 90 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 WDR73Q6P4I2 378 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 C9orf106Q8NAJ2 232 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 OR2Z1Q8NG97 314 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 OSTCQ9NRP0 149 aa13.65□□□□□ -0.22
CTSB-228ENST00000533455 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 CDKN1AP38936 164 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 GNG4P50150 75 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 C17orf58Q2M2W7 97 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 OR8I2Q8N0Y5 310 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 ADTRPQ96IZ2 230 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 RAB9BQ9NP90 201 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 IL19Q9UHD0 177 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 CACNA1GO43497 2377 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 F2Z2F3 143 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 IGHV3-7P01780 117 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
CTSB-228ENST00000533455 FRMD6-AS1P0C7T7 363 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
CTSB-228ENST00000533455 CX3CL1P78423 397 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 OR5I1Q13606 314 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 CT45A1Q5HYN5 189 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 CT45A3Q8NHU0 189 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 SLC35E1Q96K37 410 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 VAMP8Q9BV40 100 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
CTSB-228ENST00000533455 IGHV3OR15-7A0A075B7D8 119 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 HELTA6NFD8 242 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 G0S2P27469 103 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 PSG5Q15238 335 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 TDRG1Q3Y452 100 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 OR10J3Q5JRS4 329 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 FAM169BQ8N8A8 192 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 SAMD10Q9BYL1 202 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 TECRQ9NZ01 308 aaKnown RBP13.63□□□□□ -0.23
CTSB-228ENST00000533455 COL8A2P25067 703 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 UTF1Q5T230 341 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 PNKDQ8N490 385 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 ZNRF1Q8ND25 227 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 GNB4Q9HAV0 340 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 PLSCR4Q9NRQ2 329 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 PRNDQ9UKY0 176 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 ZNF257Q9Y2Q1 563 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 OR51B2Q9Y5P1 312 aa13.63□□□□□ -0.23
CTSB-228ENST00000533455 PRR14LQ5THK1 2151 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 NCOR1O75376 2440 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 GPX1P07203 203 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 ZNF25P17030 456 aaPredicted RBP13.62□□□□□ -0.23
CTSB-228ENST00000533455 CRYBB3P26998 211 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 TMEM136Q6ZRR5 245 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 VN1R17PQ8TDU5 208 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 ZNF503Q96F45 646 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 FBXL7Q9UJT9 491 aa13.62□□□□□ -0.23
CTSB-228ENST00000533455 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 ISLRO14498 428 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 ACTL6BO94805 426 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 LHBP01229 141 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 OR5G3P0C626 314 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 IRF2P14316 349 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 BRS3P32247 399 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
CTSB-228ENST00000533455 PRCDQ00LT1 54 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 RTL8BQ17RB0 113 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 MSMPQ1L6U9 139 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 SIGLECL1Q8N7X8 197 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 Q8N976 141 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 ZNF439Q8NDP4 499 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 KBTBD11-OT1A0A1B0GTJ5 212 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 CASP6P55212 293 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 MRPS11P82912 194 aaKnown RBP13.61□□□□□ -0.23
CTSB-228ENST00000533455 GAGE1Q13065 139 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 TIGITQ495A1 244 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 LEAP2Q969E1 77 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 ZNF586Q9NXT0 402 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 NAT8BQ9UHF3 227 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms