RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TMEM222Q9H0R3 208 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 LINC01619G3V211 115 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 BRI3O95415 125 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 TRGV3P03979 118 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 UCP1P25874 307 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 INSL3P51460 131 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
PKP3-209ENST00000533069 ASPHD1Q5U4P2 390 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 MS4A10Q96PG2 267 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 ALG5Q9Y673 324 aa12.89□□□□□ -0.35
PKP3-209ENST00000533069 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 TNFSF12O43508 249 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 SSNA1O43805 119 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
PKP3-209ENST00000533069 RPL30P62888 115 aaKnown RBP12.88□□□□□ -0.35
PKP3-209ENST00000533069 TNXAQ16473 311 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 MRGPRG-AS1Q2M3A8 158 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 C12orf45Q8N5I9 185 aaPredicted RBP12.88□□□□□ -0.35
PKP3-209ENST00000533069 OR51H1Q8NH63 302 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 ASB13Q8WXK3 278 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 RHOVQ96L33 236 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 ZNF355PQ9NSJ1 428 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 TMEM56-RWDD3S4R434 201 aa12.88□□□□□ -0.35
PKP3-209ENST00000533069 ACTL6BO94805 426 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 CDS2O95674 445 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 HPRT1P00492 218 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 TMEM187Q14656 261 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 OR2B11Q5JQS5 317 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 CADM3Q8N126 398 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
PKP3-209ENST00000533069 SEC22CQ9BRL7 303 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 MED28Q9H204 178 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 PLEKHA2Q9HB19 425 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
PKP3-209ENST00000533069 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 A0A087WW49 117 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 A0A0B4J293 547 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 OVOL1O14753 267 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 IFNA21P01568 189 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
PKP3-209ENST00000533069 HLA-GP17693 338 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
PKP3-209ENST00000533069 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 CHAC2Q8WUX2 184 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 RBPMSQ93062 196 aaKnown RBP12.86□□□□□ -0.35
PKP3-209ENST00000533069 TP53RKQ96S44 253 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 ZNF430Q9H8G1 570 aaPredicted RBP12.86□□□□□ -0.35
PKP3-209ENST00000533069 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
PKP3-209ENST00000533069 OR2A4O95047 310 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 HRASP01112 189 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 OR2A7Q96R45 310 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
PKP3-209ENST00000533069 DBX1A6NMT0 343 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 KBTBD11O94819 623 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 NQO2P16083 231 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 MAS1LP35410 378 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 SLURP1P55000 103 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 BRWD1-AS2P59051 145 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 ERVK-16P61578 105 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 PUSL1Q8N0Z8 303 aaKnown RBP12.84□□□□□ -0.35
PKP3-209ENST00000533069 TMEM167AQ8TBQ9 72 aa12.84□□□□□ -0.35
PKP3-209ENST00000533069 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
PKP3-209ENST00000533069 LSM10Q969L4 123 aaKnown RBP12.84□□□□□ -0.35
PKP3-209ENST00000533069 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
PKP3-209ENST00000533069 HMX3A6NHT5 357 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 SLC25A6P12236 298 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 ZP3P21754 424 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 BCAP31P51572 246 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 CYCSP99999 105 aaKnown RBP12.83□□□□□ -0.36
PKP3-209ENST00000533069 ANKRD55Q3KP44 614 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 SP6Q3SY56 376 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 VKORC1L1Q8N0U8 176 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 OR52B4Q8NGK2 314 aa12.83□□□□□ -0.36
PKP3-209ENST00000533069 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
PKP3-209ENST00000533069 ZNF256Q9Y2P7 627 aaPredicted RBP12.83□□□□□ -0.36
PKP3-209ENST00000533069 SAP30O75446 220 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 FGF2P09038 288 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 APELAP0DMC3 54 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 LPAR6P43657 344 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms