RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 MINDY2Q8NBR6 621 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR5T1Q8NG75 326 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 LHFPL5Q8TAF8 219 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 IL22RA2Q969J5 263 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 P2RX4Q99571 388 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 FKBP11Q9NYL4 201 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 HMX3A6NHT5 357 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 IGLV1-40P01703 118 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 RPLP1P05386 114 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 ANKRD55Q3KP44 614 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 C19orf54Q5BKX5 351 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 FAM219AQ8IW50 185 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 SLC35G3Q8N808 338 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR1L8Q8NGR8 309 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 COQ8AQ8NI60 647 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM56Q96MV1 263 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 PDCD10Q9BUL8 212 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 GPR61Q9BZJ8 451 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM56-RWDD3S4R434 201 aa10.09□□□□□ -0.79
TRAPPC4-212ENST00000533058 C15orf61A6NNL5 157 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 NUDT19A8MXV4 375 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 IFNA17P01571 189 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 IL6RP08887 468 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 TRAPPC2P0DI81 140 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 TRAPPC2BP0DI82 140 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 IGLL1P15814 213 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 SSBP2P81877 361 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 DHRS2Q13268 280 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 DCTN2Q13561 401 aaKnown RBP10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 C8orf86Q6ZUL3 223 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 LYZL2Q7Z4W2 148 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 UXS1Q8NBZ7 420 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 KLHL30-AS1Q8NEE0 82 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 TMEM68Q96MH6 324 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 MCRIP2Q9BUT9 160 aaKnown RBP10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 QTRT1Q9BXR0 403 aaKnown RBP10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 CACNG5Q9UF02 275 aa10.08□□□□□ -0.8
TRAPPC4-212ENST00000533058 A0A0B4J2A0 478 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 A0A0G2JRQ6 117 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 TEX50A0A1B0GTY4 177 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 HOXB5P09067 269 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 RUNX1Q01196 453 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 KIAA0141Q14154 515 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 THOC7Q6I9Y2 204 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 C18orf65Q6ZTR6 163 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 CADM3Q8N126 398 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR52B4Q8NGK2 314 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR5M8Q8NGP6 311 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 LSM10Q969L4 123 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 GPR146Q96CH1 333 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 MS4A10Q96PG2 267 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 SEC22CQ9BRL7 303 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 ALX4Q9H161 411 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 PALMDQ9NP74 551 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 ENY2Q9NPA8 101 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 SHPKQ9UHJ6 478 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 TNCP24821 2201 aa10.07□□□□□ -0.8
TRAPPC4-212ENST00000533058 A0A0B4J293 547 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 TEX22C9J3V5 150 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 E7EUB6 86 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 CCL24O00175 119 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 IFNA21P01568 189 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 REG1AP05451 166 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 FGF2P09038 288 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 P0C879 139 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 SULT1A3P0DMM9 295 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 SULT1A4P0DMN0 295 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 RAB9AP51151 201 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 EGFEM1PQ0D2K5 195 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 ZNF491Q8N8L2 437 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 DUSP18Q8NEJ0 188 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR1S1Q8NH92 325 aa10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 GPN1Q9HCN4 374 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-212ENST00000533058 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 ST8SIA3O43173 380 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 NXPH3O95157 252 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 PTTG1O95997 202 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 DHFRP00374 187 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 TRGV3P03979 118 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR13C7P0DN81 318 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 DEFA4P12838 97 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 AREGP15514 252 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 SPNP16150 400 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms