RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CD69Q07108 199 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 BEND2Q8NDZ0 799 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 DICER1Q9UPY3 1922 aaKnown RBP9.04□□□□□ -0.96
COLCA1-203ENST00000532918 PRSS2P07478 247 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 ZNF124Q15973 351 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 CLDND2Q8NHS1 167 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 CELA3BP08861 270 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 OR13A1Q8NGR1 328 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 GATAD1Q8WUU5 269 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 MFAP2P55001 183 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 CTAG1AP78358 180 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 ZNF672Q499Z4 452 aaPredicted RBP9.04□□□□□ -0.96
COLCA1-203ENST00000532918 FAM201AQ5SY85 155 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 NPIPB3Q92617 1050 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 GPR82Q96P67 336 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.03□□□□□ -0.96
COLCA1-203ENST00000532918 CSRP3P50461 194 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 HERPUD1Q15011 391 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 RPL39P5Q59GN2 51 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 WFDC6Q9BQY6 131 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
COLCA1-203ENST00000532918 MDKP21741 143 aaPredicted RBP9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PAPPA-AS1Q5QFB9 102 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
COLCA1-203ENST00000532918 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 TM2D1Q9BX74 207 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 TET1Q8NFU7 2136 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PQLC2LA1A4F0 135 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PINLYPA6NC86 204 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PLAUP00749 431 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 MIC13Q5XKP0 118 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 ASPHD2Q6ICH7 369 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 SIGMAR1Q99720 223 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 ARID2Q68CP9 1835 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 CEACAM4O75871 244 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 MDS2Q8NDY4 140 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 PARLQ9H300 379 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 ELF5Q9UKW6 265 aaPredicted RBP9.03□□□□□ -0.96
COLCA1-203ENST00000532918 AHCTF1Q8WYP5 2266 aa9.03□□□□□ -0.96
COLCA1-203ENST00000532918 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.96
COLCA1-203ENST00000532918 NPFFO15130 113 aa9.02□□□□□ -0.96
COLCA1-203ENST00000532918 CIRBPQ14011 172 aaKnown RBP9.02□□□□□ -0.96
COLCA1-203ENST00000532918 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.96
COLCA1-203ENST00000532918 TRAV40A0A0B4J280 105 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 OOSP1A8MZH6 123 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 H0YL77 283 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 CKS1BP61024 79 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 PRSS8Q16651 343 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 HLA-DQA1P01909 254 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 HLA-DQB1P01920 261 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 SRD5A1P18405 259 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 STHQ8IWL8 128 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 F12P00748 615 aaPredicted RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 BCL2P10415 239 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 RARRES2Q99969 163 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 IFI27L2Q9H2X8 130 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 JKAMPQ9P055 326 aa9.02□□□□□ -0.97
COLCA1-203ENST00000532918 F11RQ9Y624 299 aaKnown RBP9.02□□□□□ -0.97
COLCA1-203ENST00000532918 NSUN5P1Q3KNT7 163 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 PUSL1Q8N0Z8 303 aaKnown RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 BEX4Q9NWD9 120 aaPredicted RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 A0A0G2JNJ9 132 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV1-46P01743 117 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 GPR183P32249 361 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 ZNF56Q15929 161 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 CLEC19AQ6UXS0 136 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 RGP1Q92546 391 aaPredicted RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 Q9UFV3 132 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 TPRP12270 2363 aaKnown RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 YPEL1O60688 119 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 PAX1P15863 534 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 CXCL3P19876 107 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 PEAR1Q5VY43 1037 aaPredicted RBP9.01□□□□□ -0.97
COLCA1-203ENST00000532918 MRAP2Q96G30 205 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 YPEL2Q96QA6 119 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 RPRMQ9NS64 109 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 SVILO95425 2214 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 IGHG3P01860 377 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 MINOS1Q5TGZ0 78 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 CD200R1LQ6Q8B3 271 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms