RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 MRPL20Q9BYC9 149 aaKnown RBP12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 LRRK1Q38SD2 2015 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 A0A087WWC5 75 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 CCL3L1P16619 93 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 ICAM4Q14773 271 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 Q6ZN92 141 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 C1orf147Q96MC9 270 aaPredicted RBP12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 TBX15Q96SF7 602 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PROK2Q9HC23 129 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PAM16Q9Y3D7 125 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PCNX2A6NKB5 2137 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 TRAV30A0A087WSZ9 112 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 LILRA1O75019 489 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 CD55P08174 381 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PPOXP50336 477 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 UNQ5815/PRO19632Q6UWF5 114 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 OR2T8A6NH00 312 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 MOSP00540 346 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 FCGR2BP31994 310 aaPredicted RBP12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 REG4Q9BYZ8 158 aa12.79□□□□□ -0.36
PCDHA3-202ENST00000532566 TRBV6-6A0A0A6YYG2 114 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 TIMP3P35625 211 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 CA7P43166 264 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 CACNG8Q8WXS5 425 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 MAP1LC3CQ9BXW4 147 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 LOC105371267A0A1B0GV96 52 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 F5H697 171 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 Q6ZS49 121 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 CGAP01215 116 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 GCGP01275 180 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 CD5P06127 495 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 HOXA4Q00056 320 aaPredicted RBP12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 MBNL2Q5VZF2 373 aaKnown RBP12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 DIRC3C9JPN6 131 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 G0S2P27469 103 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 CCL20P78556 96 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 ZCCHC14Q8WYQ9 949 aaKnown RBP12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 DPM3Q9P2X0 92 aa12.78□□□□□ -0.36
PCDHA3-202ENST00000532566 ATP5G3P48201 142 aa12.77□□□□□ -0.36
PCDHA3-202ENST00000532566 COLCA1Q6ZS62 124 aa12.77□□□□□ -0.36
PCDHA3-202ENST00000532566 TMEM144Q7Z5S9 345 aa12.77□□□□□ -0.36
PCDHA3-202ENST00000532566 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.36
PCDHA3-202ENST00000532566 NPIPB11E5RHQ5 1161 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 BMPR1BO00238 502 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 UPK2O00526 184 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 LCN2P80188 198 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 ABCA4P78363 2273 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 LINC00305Q7Z4B0 112 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 DPF1Q92782 380 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
PCDHA3-202ENST00000532566 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 H3BTX0 84 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 IGHV1-46P01743 117 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 IGHG3P01860 377 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 PRSS1P07477 247 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 ACAA1P09110 424 aaPredicted RBP12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 BET1LQ9NYM9 111 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 WDR83OSQ9Y284 106 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 SLC25A15Q9Y619 301 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 J3KRW8 73 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 HSPB8Q9UJY1 196 aa12.76□□□□□ -0.37
PCDHA3-202ENST00000532566 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 Q6P435 159 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 SCO2A0A1W2PP80 73 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 OR9G9P0C7N8 305 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 GPX4P36969 197 aaPredicted RBP12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 RNFT1Q5M7Z0 435 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 LYL1P12980 280 aa12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 KIF26AQ9ULI4 1882 aaPredicted RBP12.75□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 AMY1AP04745 511 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 NBEAP1P0C6P0 100 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 IL4P05112 153 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms