RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 WNT2P09544 360 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 NABP2Q9BQ15 211 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
PTPRK-221ENST00000532331 CX3CL1P78423 397 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.89
PTPRK-221ENST00000532331 C5orf52A6NGY3 159 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 CLPSP04118 112 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 CKS2P33552 79 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.89
PTPRK-221ENST00000532331 C12orf54Q6X4T0 127 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 PHLDA3Q9Y5J5 127 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 A0A0G2JK05 382 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.89
PTPRK-221ENST00000532331 IGHV3-23P01764 117 aa9.46□□□□□ -0.89
PTPRK-221ENST00000532331 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 UBE2L6O14933 153 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 NBR2O15453 112 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 ANOS1P23352 680 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 FAM53AQ6NSI3 398 aaPredicted RBP9.46□□□□□ -0.9
PTPRK-221ENST00000532331 ZFP30Q9Y2G7 519 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 CA2P00918 260 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 FGFBP3Q8TAT2 258 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 GALNT14Q96FL9 552 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 Q96MF0 132 aa9.46□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3-11P01762 117 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 IL4P05112 153 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 CD99P14209 185 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 TMEM177Q53S58 311 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 AMMECR1LQ6DCA0 310 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 ITLN2Q8WWU7 325 aaPredicted RBP9.45□□□□□ -0.9
PTPRK-221ENST00000532331 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 GPX1P07203 203 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 DLX6P56179 175 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 OR4A47Q6IF82 309 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 M0R3E3 92 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 GAS1P54826 345 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 RND3P61587 244 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 PLSCR2Q9NRY7 297 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 RTTNQ86VV8 2226 aa9.45□□□□□ -0.9
PTPRK-221ENST00000532331 A0A1B0GTI1 187 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SIGLEC5O15389 551 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
PTPRK-221ENST00000532331 PSMG3Q9BT73 122 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 GCGP01275 180 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 IGKV3-15P01624 115 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 CRYBB3P26998 211 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 CYP2G1PQ6ZSU1 146 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF525Q8N782 197 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 TBX15Q96SF7 602 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SHISA3A0PJX4 238 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 CBY3A6NI87 242 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 TMEM178BH3BS89 294 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 DANCRP0C864 163 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 B3GALT5-AS1P59052 145 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 PGLYRP4Q96LB8 373 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SIAH2O43255 324 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 VN1R17PQ8TDU5 208 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 BPESC1Q9GZL8 116 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 A6NDN8 102 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 DPRXA6NFQ7 191 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 WISP1O95388 367 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 PRB1P04280 392 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 WDR25Q64LD2 544 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-221ENST00000532331 PET117Q6UWS5 81 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
PTPRK-221ENST00000532331 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
PTPRK-221ENST00000532331 PLXNA4Q9HCM2 1894 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 IFI27L2Q9H2X8 130 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 RALGAPA1Q6GYQ0 2036 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 GPR183P32249 361 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 CD81P60033 236 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 LINC00305Q7Z4B0 112 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 GGACTQ9BVM4 153 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 C21orf62Q9NYP8 219 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 H3BTX0 84 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 AMY1AP04745 511 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 MYOD1P15172 320 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 MDKP21741 143 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-221ENST00000532331 A0A087X0M5 115 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 A0A1B0GX30 115 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 CD8AP01732 235 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 GCHFRP30047 84 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 PLAURQ03405 335 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 RARRES2Q99969 163 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 S4R3C0 116 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 DOCK8Q8NF50 2099 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms