RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SLIT3O75094 1523 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 IGHV1-69-2A0A0G2JMI3 117 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 TRDV1A0A1B0GX56 115 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 C5orf63A6NC05 138 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 PGPA6NDG6 321 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 OR51F1A6NGY5 319 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 NCBP2LA6PVI3 153 aaKnown RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF670-ZNF695F2Z2N8 137 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 F6UB75 175 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 H0YJW9 148 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ISLRO14498 428 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 NPIPB7O75200 414 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 PDCD6O75340 191 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 CXorf1O96002 111 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 PMP2P02689 132 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 P0DMU3 169 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FGF6P10767 208 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 GADD45AP24522 165 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 OR10J1P30954 320 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 IL2RGP31785 369 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 MYCNOSP40205 109 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 CTRLP40313 264 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 CCL23P55773 120 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FABP5Q01469 135 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 HES1Q14469 280 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 PDGFRLQ15198 375 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 VMA21Q3ZAQ7 101 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 LRRC10Q5BKY1 277 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 Q5BKY6 102 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SPATA31B1PQ5VZV4 182 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 AMMECR1LQ6DCA0 310 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 MORN3Q6PF18 240 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF705AQ6ZN79 300 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 Q6ZN92 141 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 Q6ZRU5 148 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SSX8Q7RTT4 187 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SLC35E3Q7Z769 313 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A45Q8N413 288 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 TEX29Q8N6K0 151 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ZFP62Q8NB50 900 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 BPIFB6Q8NFQ5 453 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 OR10AD1Q8NGE0 317 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF431Q8TF32 576 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FGF11Q92914 225 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A44Q96H78 314 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SNRNP25Q9BV90 132 aaKnown RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SFXN3Q9BWM7 321 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 POLR2J3Q9H1A7 115 aaKnown RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 TCEAL2Q9H3H9 227 aaPredicted RBP2.38□□□□□ -2.03
PTPRK-220ENST00000531466 DUSP21Q9H596 190 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 HEBP1Q9NRV9 189 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 FUT9Q9Y231 359 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 SIGLEC7Q9Y286 467 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF257Q9Y2Q1 563 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 KCNE3Q9Y6H6 103 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 PLA2R1Q13018 1463 aa2.38□□□□□ -2.03
PTPRK-220ENST00000531466 CDK13Q14004 1512 aaKnown RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 IGKV2D-24A0A075B6R9 120 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 TRAV4A0A0B4J268 109 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 TCRBV3S1A0A5B6 114 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 B4DEV8 164 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 M0R233 179 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF682O95780 498 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 IGKV1D-16P01601 117 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 CTSDP07339 412 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SMIM10L2AP0DMW4 78 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SMIM10L2BP0DMW5 78 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 GZMBP10144 247 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 CTLA4P16410 223 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF93P35789 620 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SNCAP37840 140 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ATP5G3P48201 142 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 RBM11P57052 281 aaKnown RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM258P61165 79 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 CRADDP78560 199 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ATP5G2Q06055 141 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 KLRD1Q13241 179 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 EIF3IQ13347 325 aaKnown RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 MSMO1Q15800 293 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 MEIG1Q5JSS6 88 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 KDM4DQ6B0I6 523 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 LCN15Q6UWW0 184 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 HIST3H2BBQ8N257 126 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 KCNRGQ8N5I3 272 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 DCAF4L2Q8NA75 395 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 OR5D14Q8NGL3 314 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 OR8D4Q8NGM9 314 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 OR52P1PQ8NH57 321 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 OR5AK2Q8NH90 309 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 RTN4IP1Q8WWV3 396 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A46Q96AG3 418 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 RAB37Q96AX2 223 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 MRPS24Q96EL2 167 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms