RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 ZNF367Q7RTV3 350 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 OR13F1Q8NGS4 319 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 VN1R17PQ8TDU5 208 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 VCXQ9H320 206 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 DAZ1Q9NQZ3 744 aaKnown RBP9.76□□□□□ -0.85
HIF3A-214ENST00000531043 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 NDUFB11Q9NX14 153 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 FBXL17Q9UF56 701 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 OR13C7P0DN81 318 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 TBCEQ15813 527 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-214ENST00000531043 POU2AF1Q16633 256 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 SLC25A24Q6NUK1 477 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 GDPD1Q8N9F7 314 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 LGALS14Q8TCE9 139 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 GALNT14Q96FL9 552 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 RNF2Q99496 336 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 QTRT1Q9BXR0 403 aaKnown RBP9.75□□□□□ -0.85
HIF3A-214ENST00000531043 DNAH17Q9UFH2 4485 aa9.75□□□□□ -0.85
HIF3A-214ENST00000531043 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 K7EIM0 57 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 NDUFA4O00483 81 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
HIF3A-214ENST00000531043 PPYP01298 95 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 TFPI2P48307 235 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 TAS2R31P59538 309 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 FXYD4P59646 89 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 ARL6IP1Q15041 203 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 LAMTOR1Q6IAA8 161 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 TMEM217Q8N7C4 229 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
HIF3A-214ENST00000531043 COMMD5Q9GZQ3 224 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 SLC5A7Q9GZV3 580 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 CSTL1Q9H114 145 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 C21orf62Q9NYP8 219 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 DAPK2Q9UIK4 370 aa9.74□□□□□ -0.85
HIF3A-214ENST00000531043 DNAH2Q9P225 4427 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 PKHD1P08F94 4074 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 NOTOA8MTQ0 251 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 SERPINE2P07093 398 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 NQO2P16083 231 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 ZNF818PQ6ZRF7 136 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 UBAC2Q8NBM4 344 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 BEST4Q8NFU0 473 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 OR5H6Q8NGV6 325 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 OR11H2Q8NH07 326 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 SLC25A38Q96DW6 304 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 RARRES2Q99969 163 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 SRSF8Q9BRL6 282 aaKnown RBP9.73□□□□□ -0.85
HIF3A-214ENST00000531043 SMPXQ9UHP9 88 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 NSG2Q9Y328 171 aa9.73□□□□□ -0.85
HIF3A-214ENST00000531043 DYNC1H1Q14204 4646 aaKnown RBP9.72□□□□□ -0.85
HIF3A-214ENST00000531043 IGHV3OR16-13A0A075B7E8 117 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 IGHV3-74A0A0B4J1X5 117 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 K7EMT4 169 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 CHEK1O14757 476 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 HPRT1P00492 218 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 CLEC2LP0C7M8 214 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 TRAPPC2P0DI81 140 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 TRAPPC2BP0DI82 140 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 ARPC4P59998 168 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 MSMO1Q15800 293 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 HOGA1Q86XE5 327 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 DMBX1Q8NFW5 382 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 GATAD1Q8WUU5 269 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 HINT2Q9BX68 163 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 NDUFA4L2Q9NRX3 87 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 TXNL4BQ9NX01 149 aaKnown RBP9.72□□□□□ -0.85
HIF3A-214ENST00000531043 RHBDL2Q9NX52 303 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 THYN1Q9P016 225 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 ETV7Q9Y603 341 aa9.72□□□□□ -0.85
HIF3A-214ENST00000531043 F11RQ9Y624 299 aaKnown RBP9.72□□□□□ -0.85
HIF3A-214ENST00000531043 TRAV18A0A075B6X5 111 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 ERICH4A6NGS2 130 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 DBX1A6NMT0 343 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 IGHV3-48P01763 117 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 CTSGP08311 255 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 RBMS2Q15434 407 aaKnown RBP9.71□□□□□ -0.86
HIF3A-214ENST00000531043 Q56UQ5 140 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 FAM90A2PQ658T7 463 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 SPSB3Q6PJ21 355 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 TMEM17Q86X19 198 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 OR1L8Q8NGR8 309 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 AIFM2Q9BRQ8 373 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 PLEKHA2Q9HB19 425 aa9.71□□□□□ -0.86
HIF3A-214ENST00000531043 RRP15Q9Y3B9 282 aaKnown RBP9.71□□□□□ -0.86
HIF3A-214ENST00000531043 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 MEIS3P1A6NDR6 274 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 C15orf62A8K5M9 175 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms