RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 IFNA21P01568 189 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 TRAPPC2P0DI81 140 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 TRAPPC2BP0DI82 140 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 TATDN3Q17R31 274 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 ZNF329Q86UD4 541 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 WFDC12Q8WWY7 111 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 FYTTD1Q96QD9 318 aaKnown RBP13.28□□□□□ -0.28
SF3B2-211ENST00000531041 MDFIQ99750 246 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 HMX3A6NHT5 357 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 IGHG4P01861 327 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 COMMD1Q8N668 190 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 UXS1Q8NBZ7 420 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 OR5AU1Q8NGC0 362 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 OR52E5Q8NH55 327 aa13.27□□□□□ -0.29
SF3B2-211ENST00000531041 A0A1W2PN81 502 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 IGLC7A0M8Q6 106 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 SOX15O60248 233 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 PITX3O75364 302 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 APELAP0DMC3 54 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 CHRNA7P36544 502 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 PRCDQ00LT1 54 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-211ENST00000531041 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 C10orf99Q6UWK7 81 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-211ENST00000531041 OR10W1Q8NGF6 305 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 OR5M8Q8NGP6 311 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 PDCD10Q9BUL8 212 aa13.26□□□□□ -0.29
SF3B2-211ENST00000531041 MPTX1A8MV57 137 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 IFNA17P01571 189 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 IGLV1-40P01703 118 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 SPCS3P61009 180 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 FAM110DQ8TAY7 271 aaPredicted RBP13.25□□□□□ -0.29
SF3B2-211ENST00000531041 HINT2Q9BX68 163 aa13.25□□□□□ -0.29
SF3B2-211ENST00000531041 NPIPB5A8MRT5 1133 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 AREGP15514 252 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 PSMB8P28062 276 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 KRTAP10-3P60369 221 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 FOXE3Q13461 319 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 RNF152Q8N8N0 203 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 OR5T1Q8NG75 326 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 OR1S1Q8NH92 325 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 HSPB7Q9UBY9 170 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 ALG5Q9Y673 324 aa13.24□□□□□ -0.29
SF3B2-211ENST00000531041 FAM90A26D6RGX4 464 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 INS-IGF2F8WCM5 200 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 BRI3O95415 125 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 CRYGCP07315 174 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 ELANEP08246 267 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 CTRB1P17538 263 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 PSMB6P28072 239 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 WT1-ASQ06250 92 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 CTRB2Q6GPI1 263 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 MRPL41Q8IXM3 137 aaKnown RBP13.23□□□□□ -0.29
SF3B2-211ENST00000531041 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 ZNF747Q9BV97 191 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
SF3B2-211ENST00000531041 H3BUA1 57 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 CCSO14618 274 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 FBXO24O75426 580 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 C2orf68Q2NKX9 166 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-211ENST00000531041 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 CITED1Q99966 193 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 SSNA1O43805 119 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 CD28P10747 220 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 CD83Q01151 205 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 SPINK9Q5DT21 86 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 CXorf66Q5JRM2 361 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-211ENST00000531041 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 OR4D5Q8NGN0 318 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 SLA2Q9H6Q3 261 aa13.22□□□□□ -0.29
SF3B2-211ENST00000531041 C13orf42A0A1B0GVH6 325 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 C5orf51A6NDU8 294 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 NXPH3O95157 252 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 REG1AP05451 166 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 PF4V1P10720 104 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 RAB9AP51151 201 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 ERHP84090 104 aaKnown RBP13.21□□□□□ -0.3
SF3B2-211ENST00000531041 ID3Q02535 119 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.3
SF3B2-211ENST00000531041 KLK9Q2XQG4 91 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 TMEM65Q6PI78 240 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 GSG1LQ6UXU4 331 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 OR2C3Q8N628 320 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 ZBTB8BQ8NAP8 495 aaPredicted RBP13.21□□□□□ -0.3
SF3B2-211ENST00000531041 MYOZ3Q8TDC0 251 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 C2orf50Q96LR7 162 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 KLK15Q9H2R5 256 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 KLK9Q9UKQ9 250 aa13.21□□□□□ -0.3
SF3B2-211ENST00000531041 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 FAM25EA8MYX2 175 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms