RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 EFNB3Q15768 340 aa14.07□□□□□ -0.16
BRCA2-204ENST00000530893 LINC01551Q86U37 167 aa14.07□□□□□ -0.16
BRCA2-204ENST00000530893 IGKV1-16P04430 117 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 UBE2G2P60604 165 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PRR20EP86478 221 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PRR20CP86479 221 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PRR20DP86480 221 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PRR20BP86481 221 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PRR20AP86496 221 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 KCNIP4Q6PIL6 250 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 HIST3H2BBQ8N257 126 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 PITPNC1Q9UKF7 332 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 ARL2-SNX15V9GYD0 113 aa14.06□□□□□ -0.16
BRCA2-204ENST00000530893 ICE1Q9Y2F5 2266 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 GGCTO75223 188 aaKnown RBP14.05□□□□□ -0.16
BRCA2-204ENST00000530893 C2orf83Q53S99 150 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 TMEM144Q7Z5S9 345 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 OR1L8Q8NGR8 309 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 SSMEM1Q8WWF3 244 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 SNRNP40Q96DI7 357 aaKnown RBP14.05□□□□□ -0.16
BRCA2-204ENST00000530893 GSN-AS1Q9NRJ2 163 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 TEX50A0A1B0GTY4 177 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 NDUFB4O95168 129 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 TYMSP04818 313 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 LCN2P80188 198 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 OR5AN1Q8NGI8 311 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 HINT2Q9BX68 163 aa14.05□□□□□ -0.16
BRCA2-204ENST00000530893 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 SRRM4A7MD48 611 aaKnown RBP14.04□□□□□ -0.16
BRCA2-204ENST00000530893 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 TNFRSF13BO14836 293 aaPredicted RBP14.04□□□□□ -0.16
BRCA2-204ENST00000530893 GCHFRP30047 84 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 TMEM177Q53S58 311 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 LRRC10Q5BKY1 277 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 TMEM200BQ69YZ2 307 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 LINC00311Q8N616 119 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 OR2T10Q8NGZ9 312 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 ZNF596Q8TC21 504 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 SLC35E1Q96K37 410 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 C19orf24Q9BVV8 132 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 TMEM106BQ9NUM4 274 aa14.04□□□□□ -0.16
BRCA2-204ENST00000530893 YLPM1P49750 1951 aaKnown RBP14.04□□□□□ -0.16
BRCA2-204ENST00000530893 RIF1Q5UIP0 2472 aaKnown RBP14.04□□□□□ -0.16
BRCA2-204ENST00000530893 NDUFB3O43676 98 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 SOD3P08294 240 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 SAA1P0DJI8 122 aaPredicted RBP14.03□□□□□ -0.16
BRCA2-204ENST00000530893 NECAP1Q8NC96 275 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 OR4A5Q8NH83 315 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 SEPSECSQ9HD40 501 aaKnown RBP14.03□□□□□ -0.16
BRCA2-204ENST00000530893 MIOXQ9UGB7 285 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 RBPJQ06330 500 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 PNKDQ8N490 385 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 VSTM2AQ8TAG5 236 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 RNASE6Q93091 150 aaKnown RBP14.03□□□□□ -0.16
BRCA2-204ENST00000530893 TMEM186Q96B77 213 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 KAAG1Q9UBP8 84 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 SLC45A2Q9UMX9 530 aa14.03□□□□□ -0.16
BRCA2-204ENST00000530893 RP1L1Q8IWN7 2480 aaPredicted RBP14.03□□□□□ -0.16
BRCA2-204ENST00000530893 H0YJW9 148 aa14.02□□□□□ -0.16
BRCA2-204ENST00000530893 IGFBP2P18065 325 aa14.02□□□□□ -0.16
BRCA2-204ENST00000530893 USF1P22415 310 aaPredicted RBP14.02□□□□□ -0.16
BRCA2-204ENST00000530893 DNLZQ5SXM8 178 aa14.02□□□□□ -0.16
BRCA2-204ENST00000530893 HARBI1Q96MB7 349 aa14.02□□□□□ -0.16
BRCA2-204ENST00000530893 MRPL20Q9BYC9 149 aaKnown RBP14.02□□□□□ -0.16
BRCA2-204ENST00000530893 MGAQ8IWI9 3026 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 LAMA5O15230 3695 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 ZGRF1Q86YA3 2104 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 AKAP13Q12802 2813 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 A0A1W2PPQ1 181 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 LINC00869P0C866 280 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 MYOD1P15172 320 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 AREGP15514 252 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 CCL3L1P16619 93 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 FOXL1Q12952 345 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 C4orf17Q53FE4 359 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 PDPNQ86YL7 162 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 SPACA3Q8IXA5 215 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 ZCCHC24Q8N2G6 241 aaKnown RBP14.02□□□□□ -0.17
BRCA2-204ENST00000530893 OR4C13Q8NGP0 309 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 CACNG8Q8WXS5 425 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 CCL17Q92583 94 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 FLYWCH2Q96CP2 140 aaKnown RBP14.02□□□□□ -0.17
BRCA2-204ENST00000530893 ELOVL1Q9BW60 279 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 GPR61Q9BZJ8 451 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 COMMD5Q9GZQ3 224 aa14.02□□□□□ -0.17
BRCA2-204ENST00000530893 RNASE2P10153 161 aaKnown RBP14.01□□□□□ -0.17
BRCA2-204ENST00000530893 TBR1Q16650 682 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 PYY3Q5JQD4 70 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
BRCA2-204ENST00000530893 RND1Q92730 232 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 C11orf52Q96A22 123 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 ACY3Q96HD9 319 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 UHRF2Q96PU4 802 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 PCGF1Q9BSM1 259 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 DERL1Q9BUN8 251 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 NDUFA4L2Q9NRX3 87 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 TMEM167BQ9NRX6 74 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 SH3BGRL2Q9UJC5 107 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms