RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ZNF391Q9UJN7 358 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 SEC11AP67812 179 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 PDLIM3Q53GG5 364 aaPredicted RBP11.73□□□□□ -0.53
PCF11-204ENST00000530660 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 TMEM191AQ9H0A3 160 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 KIR3DS1Q14943 382 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 SPEM1Q8N4L4 309 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 OR1L3Q8NH93 324 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 C11orf52Q96A22 123 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 OSTCQ9NRP0 149 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 ASXL3Q9C0F0 2248 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 DHHO43323 396 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 NEURL1O76050 574 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 OR10J4P0C629 311 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 BLNKQ8WV28 456 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 SPSB4Q96A44 273 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 LY96Q9Y6Y9 160 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 H3BRM9 83 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 K7EQM0 130 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 GPM6AP51674 278 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 TIGITQ495A1 244 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 C1orf53Q5VUE5 145 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 PET117Q6UWS5 81 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 ACP7Q6ZNF0 438 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
PCF11-204ENST00000530660 NEU4Q8WWR8 484 aaPredicted RBP11.72□□□□□ -0.53
PCF11-204ENST00000530660 C15orf62A8K5M9 175 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 HBZP02008 142 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 ADH4P08319 380 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 RAB31Q13636 194 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 VSTM2AQ8TAG5 236 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.71□□□□□ -0.53
PCF11-204ENST00000530660 COL5A1P20908 1838 aaPredicted RBP11.71□□□□□ -0.53
PCF11-204ENST00000530660 hCG_38984A0A1B0GV85 526 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
PCF11-204ENST00000530660 CD300EQ496F6 205 aaPredicted RBP11.71□□□□□ -0.53
PCF11-204ENST00000530660 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 MGST2Q99735 147 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 FGF23Q9GZV9 251 aaPredicted RBP11.71□□□□□ -0.53
PCF11-204ENST00000530660 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.53
PCF11-204ENST00000530660 FER1L5A0AVI2 2057 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 ISLRO14498 428 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 SYNGR3O43761 229 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 FGF12P61328 243 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.54
PCF11-204ENST00000530660 TREML4Q6UXN2 200 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.54
PCF11-204ENST00000530660 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.54
PCF11-204ENST00000530660 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.54
PCF11-204ENST00000530660 EYSQ5T1H1 3165 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 PSMB11A5LHX3 300 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 IGFBP2P18065 325 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 LINC00205P59089 165 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
PCF11-204ENST00000530660 EML6Q6ZMW3 1958 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 ZNF808Q8N4W9 903 aaPredicted RBP11.7□□□□□ -0.54
PCF11-204ENST00000530660 UCN2Q96RP3 112 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 GEMIN7Q9H840 131 aaKnown RBP11.7□□□□□ -0.54
PCF11-204ENST00000530660 GCM1Q9NP62 436 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 A0A1W2PPM0 123 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 ACTL6BO94805 426 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 IGLV2-8P01709 118 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 COX8AP10176 69 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 GABRG2P18507 467 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 CA6P23280 308 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 ARL4DP49703 201 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 ZNF138P52744 262 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
PCF11-204ENST00000530660 FAM69BQ5VUD6 431 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 RABAC1Q9UI14 185 aa11.7□□□□□ -0.54
PCF11-204ENST00000530660 TRIOO75962 3097 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
PCF11-204ENST00000530660 SYNGR1O43759 233 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 P04436 131 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 NTF4P34130 210 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 FASLGP48023 281 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 METTL7AQ9H8H3 244 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 REG1BP48304 166 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 EFNB3Q15768 340 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 C10orf128Q5T292 105 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 MS4A5Q9H3V2 200 aa11.69□□□□□ -0.54
PCF11-204ENST00000530660 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 A6NDN8 102 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.68□□□□□ -0.54
PCF11-204ENST00000530660 ZNF32P17041 273 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 OPRK1P41145 380 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 C19orf24Q9BVV8 132 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 WIPI1Q5MNZ9 446 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms