RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 SNCAP37840 140 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 CAV2P51636 162 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 RPP30P78346 268 aaKnown RBP6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SPANXN5Q5MJ07 72 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SLC35E3Q7Z769 313 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ZNF546Q86UE3 836 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 INO80EQ8NBZ0 244 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SMIM8Q96KF7 97 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 CIB3Q96Q77 187 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 JMJD8Q96S16 334 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 HSPB9Q9BQS6 159 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 FAM103A1Q9BTL3 118 aaKnown RBP6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 PRSS22Q9GZN4 317 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 NPFFR1Q9GZQ6 430 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ITPR3Q14573 2671 aa6.74□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 FAM24AA6NFZ4 105 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 CGB1A6NKQ9 187 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 LINC01548A6NM66 108 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TEX22C9J3V5 150 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 H3BP45 60 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 KCNAB3O43448 404 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 LY86O95711 162 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 C1QBP02746 253 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 REG1AP05451 166 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 CRYBA1P05813 215 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 VDAC2P45880 294 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 P2RY1P47900 373 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.336e-8■■■■□ 23
NEDD8-MDP1-201ENST00000530579 PAX9P55771 341 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 PDLIM3Q53GG5 364 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 NOXA1Q86UR1 476 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 LFNGQ8NES3 379 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 HYLS1Q96M11 299 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 STRAPQ9Y3F4 350 aaKnown RBP6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 WSB1Q9Y6I7 421 aa6.73□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 FLNBO75369 2602 aaKnown RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 A0A1B0GW64 132 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 G3V3Q6 166 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 CLDN34H7C241 214 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ATP6V0E1O15342 81 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ARPC5O15511 151 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TCF21O43680 179 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TMEM50AO95807 157 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 IGHG2P01859 326 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 OR8U8P0C7N1 319 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 EGR2P11161 476 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 DEFA4P12838 97 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 LYL1P12980 280 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 AREGP15514 252 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 RPL12P30050 165 aaKnown RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 HTR2BP41595 481 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 AP2S1P53680 142 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TAS2R30P59541 319 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 HILS1P60008 231 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 RAB11AP62491 216 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 UBA52P62987 128 aaKnown RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SSBP2P81877 361 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 NDPQ00604 133 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 WT1-ASQ06250 92 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TMEM267Q0VDI3 215 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 ECSCRQ19T08 205 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TMEM65Q6PI78 240 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 UNQ5815/PRO19632Q6UWF5 114 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 Q6ZS46 218 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 HSD17B13Q7Z5P4 300 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 OR2C3Q8N628 320 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 OR5T1Q8NG75 326 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 OR11H4Q8NGC9 324 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 PPP1R14BQ96C90 147 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 OR4C12Q96R67 309 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SRSF8Q9BRL6 282 aaKnown RBP6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 SLC25A31Q9H0C2 315 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 C11orf1Q9H5F2 150 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 LINC00527Q9UJ94 153 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 U3KQ87 197 aa6.72□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 VPS13CQ709C8 3753 aa6.71□□□□□ -1.33
NEDD8-MDP1-201ENST00000530579 TRAV41A0A0B4J266 112 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 IGLC7A0M8Q6 106 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 HMSDA8MTL9 139 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 BOLA2-SMG1P6H3BVE0 249 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 TSC22D2O75157 780 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 IFNA4P05014 189 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 METTL15P1P0C7V9 234 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 HKR1P10072 659 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 NPY1RP25929 384 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 EIF2B2P49770 351 aaKnown RBP6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 NKX2-5P52952 324 aaPredicted RBP6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 OR8G2PQ6IF36 304 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 SLC25A24Q6NUK1 477 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 ACOT7LQ6ZUV0 252 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 STX12Q86Y82 276 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.34
NEDD8-MDP1-201ENST00000530579 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms