RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, human

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SVIP-204	ENST00000530199		A0A1W2PPE3	182 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	LALBA	P00709	142 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	BPGM	P07738	259 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	PYCR1	P32322	319 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	MAP2K4	P45985	399 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	MEOX2	P50222	304 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	ATP5I	P56385	69 aa	Predicted RBP	4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	C12orf74	Q32Q52	190 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199		Q3ZCU0	254 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	OR2B11	Q5JQS5	317 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	CLVS2	Q5SYC1	327 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	TBPL2	Q6SJ96	375 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	C15orf53	Q8NAA6	179 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	PROKR2	Q8NFJ6	384 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	OR2T4	Q8NH00	348 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	IFT81	Q8WYA0	676 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	SLC25A38	Q96DW6	304 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	ASB9	Q96DX5	294 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	USMG5	Q96IX5	58 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	RDH12	Q96NR8	316 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	SORT1	Q99523	831 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	KIR2DL4	Q99706	377 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	CHRDL1	Q9BU40	450 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	C20orf27	Q9GZN8	174 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199		Q9UF83	564 aa		4.61	□□□□□ -1.67
SVIP-204	ENST00000530199	SIRPB1	O00241	398 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	FFAR1	O14842	300 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	RGS16	O15492	202 aa	Predicted RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	ATP5L	O75964	103 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	OR2H2	O95918	312 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	GIG44	P09565	113 aa	Predicted RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	MIF	P14174	115 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	FMO3	P31513	532 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	KRTAP10-1	P60331	282 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	PAGE3	Q5JUK9	113 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	LELP1	Q5T871	98 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	SLC25A48	Q6ZT89	311 aa	Known RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	OR1L4	Q8NGR5	311 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	NICN1	Q9BSH3	213 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	FAM103A1	Q9BTL3	118 aa	Known RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	PARP12	Q9H0J9	701 aa	Known RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	ANKRD19P	Q9H560	264 aa		4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	EXOSC4	Q9NPD3	245 aa	Known RBP	4.6	□□□□□ -1.67
SVIP-204	ENST00000530199	FAM25E	A8MYX2	175 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	DHRS3	O75911	302 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	GLP1R	P43220	463 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	OMP	P47874	163 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	MRPL19	P49406	292 aa	Known RBP	4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	PAX5	Q02548	391 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	FAM131A	Q6UXB0	335 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	FAM58A	Q8N1B3	248 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	CHST4	Q8NCG5	386 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	OR51T1	Q8NGJ9	327 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	ZNRF2	Q8NHG8	242 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	FGGY	Q96C11	551 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199		Q9H3A6	140 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	RBFOX1	Q9NWB1	397 aa	Known RBP	4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	ABCD2	Q9UBJ2	740 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	CRCT1	Q9UGL9	99 aa		4.59	□□□□□ -1.67
SVIP-204	ENST00000530199	IGHV1OR15-1	A0A075B7D0	117 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	TMEM213	A2RRL7	107 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199		A8MWP6	167 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	BOLA2-SMG1P6	H3BVE0	249 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	S1PR2	O95136	353 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	BLVRA	P53004	296 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	DSCR10	P59022	87 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	LTC4S	Q16873	150 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	C6orf226	Q5I0X4	101 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	UQCC3	Q6UW78	93 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	SLC25A26	Q70HW3	274 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	MOB1B	Q7L9L4	216 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	FUNDC1	Q8IVP5	155 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	OR51L1	Q8NGJ5	315 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	CD300LF	Q8TDQ1	290 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	GIMAP1	Q8WWP7	306 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	CACNG8	Q8WXS5	425 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	AMELY	Q99218	206 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	OR52D1	Q9H346	318 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	HMG20A	Q9NP66	347 aa		4.58	□□□□□ -1.68
SVIP-204	ENST00000530199	IGKV1-27	A0A075B6S5	117 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	MEIKIN	A0A087WXM9	373 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	TRPC5OS	A6NMA1	111 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	CASQ2	O14958	399 aa	Predicted RBP	4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	IFNA5	P01569	189 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	C8orf88	P0DMB2	117 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	PRKACA	P17612	351 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	NPY1R	P25929	384 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	SSTR5	P35346	364 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	GZMM	P51124	257 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	SLC18A1	P54219	525 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	GNG11	P61952	73 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	SLC25A30	Q5SVS4	291 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199		Q6ZSR3	168 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	ACOT7L	Q6ZUV0	252 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	GPHB5	Q86YW7	130 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	MREG	Q8N565	214 aa		4.57	□□□□□ -1.68
SVIP-204	ENST00000530199	KCNG3	Q8TAE7	436 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms