RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SIGLEC12Q96PQ1 595 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 REG4Q9BYZ8 158 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 PRDM6Q9NQX0 595 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CCL21O00585 134 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 OTX1P32242 354 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ID1P41134 155 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 RUNX1Q01196 453 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CIRBPQ14011 172 aaKnown RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ACSF3Q4G176 576 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CT83Q5H943 113 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF826PQ6ZT77 177 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 Q6ZT83 130 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 NRN1Q9NPD7 142 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 UNC13CQ8NB66 2214 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 AMBPP02760 352 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CD5P06127 495 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 LINC00271P0C7V0 271 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CXorf66Q5JRM2 361 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 TPRX1Q8N7U7 411 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 FBLN5Q9UBX5 448 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 A0A1B0GTI1 187 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 A0A1W2PPE3 182 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 ODAMA1E959 279 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 ZNHIT1O43257 154 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 GDF9O60383 454 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 NDUFB4O95168 129 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 MDKP21741 143 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CCL1P22362 96 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 ATP1A1-AS1Q5TC04 95 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 SAMD5Q5TGI4 173 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 PRNTQ86SH4 94 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 FGFRL1Q8N441 504 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 OR4D5Q8NGN0 318 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 F2RL2O00254 374 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 GHRHP01286 108 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 HTN1P15515 57 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 BTCP35070 178 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 C2orf68Q2NKX9 166 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 PAPPA-AS1Q5QFB9 102 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 DNM1P46Q6ZS02 220 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 MUC15Q8N387 334 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 C1orf162Q8NEQ5 155 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CHCHD1Q96BP2 118 aaKnown RBP6.12□□□□□ -1.43
CTNND1-218ENST00000528232 HIGD1AQ9Y241 93 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 C1QTNF9P0C862 333 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
CTNND1-218ENST00000528232 HBBP68871 147 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CCL8P80075 99 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 C17orf82Q86X59 251 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-218ENST00000528232 PAXXQ9BUH6 204 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 PXMP4Q9Y6I8 212 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 J3KRW8 73 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 RTP5Q14D33 572 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 CSRP2Q16527 193 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 C1QL2Q7Z5L3 287 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 TAF15Q92804 592 aaKnown RBP eCLIP6.12□□□□□ -1.433e-8■■■□□ 14.9
CTNND1-218ENST00000528232 TMEM50AO95807 157 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 Q6AWC8 147 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 SLC25A28Q96A46 364 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 MOB4Q9Y3A3 225 aa6.12□□□□□ -1.43
CTNND1-218ENST00000528232 DLL1O00548 723 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF735P0CB33 412 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 NUBP1P53384 320 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 PRSS8Q16651 343 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 LRRC75BQ2VPJ9 315 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 CLPSP04118 112 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 WNT5AP41221 380 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 GNB1LQ9BYB4 327 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 KBTBD11-OT1A0A1B0GTJ5 212 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 TMEM8BA6NDV4 472 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 LINC01549A6NIU2 74 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 UBE2L6O14933 153 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 CELA3AP09093 270 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 FNDC4Q9H6D8 234 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-218ENST00000528232 ASCC3Q8N3C0 2202 aaKnown RBP6.11□□□□□ -1.43
CTNND1-218ENST00000528232 TMSB15BA0A087X1C1 80 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 A6NNC1 897 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 TMEM238C9JI98 176 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 MPZP25189 248 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 ZFP36L1Q07352 338 aaKnown RBP6.11□□□□□ -1.43
CTNND1-218ENST00000528232 MMDQ15546 238 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 S100A7L2Q5SY68 101 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 RASL11AQ6T310 242 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 FAM222BQ8WU58 562 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 RTBDNQ9BSG5 229 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-218ENST00000528232 AURKAIP1Q9NWT8 199 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-218ENST00000528232 SMPXQ9UHP9 88 aa6.11□□□□□ -1.43
CTNND1-218ENST00000528232 FAM157AC9JC47 383 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 RAMP3O60896 148 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 OR9G9P0C7N8 305 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 REG1BP48304 166 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms