RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	GCN1	Q92616	2671 aa	Known RBP	4.93	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ARHGAP32	A7KAX9	2087 aa		4.93	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ANKRD17	O75179	2603 aa	Known RBP	4.93	□□□□□ -1.62
ATPAF1-208	ENST00000526821	CSMD1	Q96PZ7	3565 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	UNC79	Q9P2D8	2635 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TRAV3	A0A0B4J244	114 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	IGHV1-3	A0A0C4DH29	117 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821		A0A1W2PPI3	338 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	IGSF23	A1L1A6	192 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RNASEK-C17orf49	H0YIS7	233 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TXNL1	O43396	289 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SYNGR2	O43760	224 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	GPR137B	O60478	399 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	CFD	P00746	253 aa	Predicted RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	HRAS	P01112	189 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	IGLV2-23	P01705	113 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	APOA2	P02652	100 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	GAPDH	P04406	335 aa	Known RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	FGF2	P09038	288 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SLC25A16	P16260	332 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	COX7A1	P24310	79 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MC5R	P33032	325 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	REG1B	P48304	166 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	AP2S1	P53680	142 aa	Predicted RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	DVL1P1	P54792	670 aa	Predicted RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TAS2R30	P59541	319 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	UBE2K	P61086	200 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	PRB3	Q04118	309 aa	Predicted RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TNFRSF9	Q07011	255 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RTL8B	Q17RB0	113 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	CLEC12B	Q2HXU8	276 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	DEFB113	Q30KQ7	82 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TPTE2P1	Q5T6R2	138 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	OR4A47	Q6IF82	309 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ZNF767P	Q75MW2	155 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	VMO1	Q7Z5L0	202 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SLC51B	Q86UW2	128 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SLC7A5P1	Q8MH63	180 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	VKORC1L1	Q8N0U8	176 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	OR2C3	Q8N628	320 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ZNF680	Q8NEM1	530 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	OR52E5	Q8NH55	327 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RNASE11	Q8TAA1	199 aa	Known RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	STOML3	Q8TAV4	291 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	LHX4	Q969G2	390 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RBMXL1	Q96E39	390 aa	Known RBP	4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SMIM8	Q96KF7	97 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RAB40C	Q96S21	281 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TBX15	Q96SF7	602 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MAGT1	Q9H0U3	335 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TMEM14B	Q9NUH8	114 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	BET1L	Q9NYM9	111 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	DPM3	Q9P2X0	92 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	WASHC3	Q9Y3C0	194 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	WSB1	Q9Y6I7	421 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SVEP1	Q4LDE5	3571 aa		4.92	□□□□□ -1.62
ATPAF1-208	ENST00000526821	KANTR	A0A1W2PQU2	76 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	FAM24A	A6NFZ4	105 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	C15orf61	A6NNL5	157 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	LEUTX	A8MZ59	168 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	OOSP1	A8MZH6	123 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	UPK2	O00526	184 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TAAR5	O14804	337 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SSSCA1	O60232	199 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TSC22D2	O75157	780 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MED6	O75586	246 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ARG1	P05089	322 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SAA1	P0DJI8	122 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	PVALB	P20472	110 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	M6PR	P20645	277 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	USF1	P22415	310 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	HTR1D	P28221	377 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	NUP62	P37198	522 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	LGALS7	P47929	136 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RAB13	P51153	203 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	UBE2E1	P51965	193 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ERVK-16	P61578	105 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	KLRD1	Q13241	179 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MRGPRG-AS1	Q2M3A8	158 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MINOS1	Q5TGZ0	78 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	PRSS57	Q6UWY2	283 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	SSX9	Q7RTT3	188 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	STPG2	Q8N412	459 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	TMEM252	Q8N6L7	170 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821		Q8N9P0	234 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	OR4C13	Q8NGP0	309 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	FLYWCH2	Q96CP2	140 aa	Known RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	BSCL2	Q96G97	398 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RNF5	Q99942	180 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ARV1	Q9H2C2	271 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	RBKS	Q9H477	322 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	FBXL17	Q9UF56	701 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	CACFD1	Q9UGQ2	172 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	FOXA2	Q9Y261	457 aa	Predicted RBP	4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	ZNF257	Q9Y2Q1	563 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	MINOS1-NBL1	R4GNA1	71 aa		4.91	□□□□□ -1.62
ATPAF1-208	ENST00000526821	LOC105371267	A0A1B0GV96	52 aa		4.9	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PMS2P5	A8MQ11	134 aa		4.9	□□□□□ -1.63
ATPAF1-208	ENST00000526821	INS-IGF2	F8WCM5	200 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms