RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 GRIN2AQ12879 1464 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 RGS12O14924 1447 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 ROBO3Q96MS0 1386 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 TRAV26-2A0A0B4J265 109 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 H3BPC8 53 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 UBFD1O14562 309 aaKnown RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 SULT1B1O43704 296 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 OR5F1O95221 314 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 RPSAP08865 295 aaKnown RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 CD24P25063 80 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 RPS20P60866 119 aaKnown RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 TAF1AQ15573 450 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 KCNJ8Q15842 424 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 PXT1Q8NFP0 134 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 ZNF471Q9BX82 626 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 CISHQ9NSE2 258 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 TXNL4BQ9NX01 149 aaKnown RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 MRPL16Q9NX20 251 aaKnown RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 DOK5Q9P104 306 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 ZNF391Q9UJN7 358 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 FAM215AQ9Y5M1 114 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 ARL5AQ9Y689 179 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 CUL7Q14999 1698 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 TRPM1Q7Z4N2 1603 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 DOCK6Q96HP0 2047 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 KIAA0586Q9BVV6 1533 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 ABCC5O15440 1437 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 ANKRD50Q9ULJ7 1429 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 TTC21AQ8NDW8 1320 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 IGKV2-24A0A0C4DH68 120 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 A0A0J9YY10 115 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 A0A1B0GX78 115 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 G3V3Q6 166 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 H3BQF6 201 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 SMIM24O75264 130 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 OR7C1O76099 320 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 NPYP01303 97 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 IGKV1-17P01599 117 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 SRP19P09132 144 aaKnown RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 CCL5P13501 91 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 KCNE1P15382 129 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 CD200P41217 278 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 TAS2R20P59543 309 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 WHAMMP3Q1A5X7 153 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 C9orf64Q5T6V5 341 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 GLT8D1Q68CQ7 371 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 DHRS4L2Q6PKH6 230 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 Q6ZS49 121 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 SSX8Q7RTT4 187 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 TCF24Q7RTU0 167 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 OR52L1Q8NGH7 329 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 TSC22D3Q99576 134 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 SIGMAR1Q99720 223 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 TTTY13Q9BZ97 58 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 YIPF3Q9GZM5 350 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 FAM96AQ9H5X1 160 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 BATF3Q9NR55 127 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 PRTFDC1Q9NRG1 225 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 SAMHD1Q9Y3Z3 626 aaKnown RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 MINOS1-NBL1R4GNA1 71 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 LAMC1P11047 1609 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 EIF4G3O43432 1585 aaKnown RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 PRDM15P57071 1507 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-211ENST00000525970 GAPVD1Q14C86 1478 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 PLXNB1O43157 2135 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 ARHGAP32A7KAX9 2087 aa2.26□□□□□ -2.05
CSDE1-211ENST00000525970 DOCK3Q8IZD9 2030 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 SCN9AQ15858 1988 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 hADV38S2A0JD32 116 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 TMEM235A6NFC5 223 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 FAM159BA6NKW6 160 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 ODF3BA8MYP8 253 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 OR2B3O76000 313 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 ZNF728P0DKX0 622 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 RPL30P62888 115 aaKnown RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 GNA12Q03113 381 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 SMARCD3Q6STE5 483 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 SLC35F6Q8N357 371 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 C12orf45Q8N5I9 185 aaPredicted RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 OR13C8Q8NGS7 320 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 ZNF675Q8TD23 568 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 ULBP3Q9BZM4 244 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 WDR61Q9GZS3 305 aaKnown RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 RNASE7Q9H1E1 156 aaKnown RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 PAQR5Q9NXK6 330 aaPredicted RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 RSL24D1Q9UHA3 163 aaKnown RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 CDK13Q14004 1512 aaKnown RBP2.25□□□□□ -2.05
CSDE1-211ENST00000525970 MYO5CQ9NQX4 1742 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 NUP160Q12769 1436 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 FAM135BQ49AJ0 1406 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 PPIP5K1Q6PFW1 1433 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 NSD3Q9BZ95 1437 aa2.25□□□□□ -2.05
CSDE1-211ENST00000525970 RTL1A6NKG5 1358 aa2.24□□□□□ -2.05
CSDE1-211ENST00000525970 ABCA10Q8WWZ4 1543 aa2.24□□□□□ -2.05
CSDE1-211ENST00000525970 TRBV20OR9-2A0A075B6H5 130 aa2.24□□□□□ -2.05
CSDE1-211ENST00000525970 TMEM238C9JI98 176 aa2.24□□□□□ -2.05
CSDE1-211ENST00000525970 PFDN1O60925 122 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms