RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 PF4P02776 101 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 H2AFB2P0C5Z0 115 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 P0C879 139 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 TRAPPC2P0DI81 140 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 TRAPPC2BP0DI82 140 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 IAPPP10997 89 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 DEFA4P12838 97 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 PSMB6P28072 239 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SLC6A1P30531 599 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SLURP1P55000 103 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 MFAP2P55001 183 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 RHOGP84095 191 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 DHODHQ02127 395 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 DHRS2Q13268 280 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 FOXE3Q13461 319 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 POU2AF1Q16633 256 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 MLANAQ16655 118 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 C2orf68Q2NKX9 166 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 AKIRIN2Q53H80 203 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM128Q5BJH2 165 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 GGNBP1Q5YKI7 109 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SLC25A24Q6NUK1 477 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 MZT2BQ6NZ67 158 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 ETV3LQ6ZN32 361 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 LINC00299Q6ZSB3 139 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 LYG2Q86SG7 212 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 NDUFA11Q86Y39 141 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 LGI3Q8N145 548 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 OR1L8Q8NGR8 309 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4A5Q8NH83 315 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 ENKURQ8TC29 256 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 MISP3Q96FF7 219 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 WDR89Q96FK6 387 aaPredicted RBP3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 GALNT14Q96FL9 552 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 RAX2Q96IS3 184 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SCGB3A2Q96PL1 93 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SPIN2AQ99865 258 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 SPIN2BQ9BPZ2 258 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 GON7Q9BXV9 100 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 MAGT1Q9H0U3 335 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 NDUFA4L2Q9NRX3 87 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM14BQ9NUH8 114 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 FBXL7Q9UJT9 491 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV3-35A0A0C4DH35 117 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 C13orf42A0A1B0GVH6 325 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 MFSD2BA6NFX1 497 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CEBPZOSA8MTT3 80 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 FAM25EA8MYX2 175 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 PPP5D1E7EU14 171 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 M0QZ24 198 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CCL24O00175 119 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CREBL2O60519 120 aaPredicted RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 SIX6O95475 246 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 SCGB1D2O95969 90 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 PRB2P02812 416 aaPredicted RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 ELANEP08246 267 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 ANXA3P12429 323 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 IGLL1P15814 213 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CTRB1P17538 263 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 EDN2P20800 178 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 MAS1LP35410 378 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 HSPE1P61604 102 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 EXOSC2Q13868 293 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 NMSQ5H8A3 153 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CTRB2Q6GPI1 263 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TREML4Q6UXN2 200 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 CLEC19AQ6UXS0 136 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 HAPLN4Q86UW8 402 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TTC9CQ8N5M4 171 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TCTEX1D1Q8N7M0 179 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 UBAC2Q8NBM4 344 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 OR11H1Q8NG94 326 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 OR5M8Q8NGP6 311 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 DEDD2Q8WXF8 326 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 OR10C1Q96KK4 312 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM56Q96MV1 263 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 FANCD2OSQ96PS1 177 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 P2RX4Q99571 388 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 C7orf50Q9BRJ6 194 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 AIFM2Q9BRQ8 373 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 RBKSQ9H477 322 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 PLEKHA3Q9HB20 300 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 GSKIPQ9P0R6 139 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 PAIP2BQ9ULR5 123 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM56-RWDD3S4R434 201 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 TENM1Q9UKZ4 2725 aa3.56□□□□□ -1.84
CHMP4A-202ENST00000524955 ATRQ13535 2644 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 IGLV11-55A0A075B6I3 123 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 A0A0B4J2A0 478 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 NPIPB5A8MRT5 1133 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 INMT-MINDY4F8WBC2 141 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 G3V4G9 280 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms