RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 C6orf15Q6UXA7 325 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-202ENST00000524773 C20orf144Q9BQM9 153 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 CACNA1GO43497 2377 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF253O75346 499 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 GPX1P07203 203 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF83P51522 516 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 SELENOTP62341 195 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 RPEL1Q2QD12 228 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 FBXW9Q5XUX1 488 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 Q6ZN92 141 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 CD177Q8N6Q3 437 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 ZNRF1Q8ND25 227 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 TAAR6Q96RI8 345 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 TXN2Q99757 166 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 B4GALT7Q9UBV7 327 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 V9GYV3 84 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 NDUFB8O95169 186 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 CD24P25063 80 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 MEOX1P50221 254 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 STARD4Q96DR4 205 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 A0A1W2PS18 150 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 SP9P0CG40 484 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 OPRK1P41145 380 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 GPR6P46095 362 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-202ENST00000524773 ACP7Q6ZNF0 438 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 ST6GALNAC6Q969X2 333 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 ARRDC1-AS1Q9H2J1 176 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 TMEM140Q9NV12 185 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 SSPNQ14714 243 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 WDR82Q6UXN9 313 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 Q8IYB0 196 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 CNEP1R1Q8N9A8 125 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 SPRR3Q9UBC9 169 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 DUSP13Q9UII6 198 aa10.86□□□□□ -0.67
CAPN1-202ENST00000524773 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 A0A1W2PN81 502 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 OR7C2O60412 319 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 VDAC2P45880 294 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-202ENST00000524773 GNG4P50150 75 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 SUMO1P63165 101 aaKnown RBP10.85□□□□□ -0.67
CAPN1-202ENST00000524773 TCF19Q9Y242 345 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 PCNX2A6NKB5 2137 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 TIMM8AO60220 97 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-202ENST00000524773 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 RANP62826 216 aaKnown RBP10.85□□□□□ -0.67
CAPN1-202ENST00000524773 SLC35E4Q6ICL7 350 aa10.85□□□□□ -0.67
CAPN1-202ENST00000524773 DUX4L9Q6RFH8 374 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-202ENST00000524773 HELTA6NFD8 242 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 M0QZK8 103 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 HYPMO75409 117 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 CA2P00918 260 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 RELBQ01201 579 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-202ENST00000524773 YLPM1P49750 1951 aaKnown RBP10.84□□□□□ -0.67
CAPN1-202ENST00000524773 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 PMCHL1Q16048 86 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 LRRC29Q8WV35 223 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
CAPN1-202ENST00000524773 PTPRBP23467 1997 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 A0A1W2PNU3 283 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-202ENST00000524773 M0QZ24 198 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 OR5G3P0C626 314 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
CAPN1-202ENST00000524773 RAB1CQ92928 201 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 SLC35E1Q96K37 410 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 IGKV1OR2-108A0A075B7D4 117 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 A8MXE2 369 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 C9orf172C9J069 976 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 C15orf65H3BRN8 121 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 BMPR1BO00238 502 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 CD46P15529 392 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 GNG10P50151 68 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 SLAQ13239 276 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 PRR27Q6MZM9 219 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 GMPPAQ96IJ6 420 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-202ENST00000524773 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-202ENST00000524773 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 CCL25O15444 150 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 SPINT2O43291 252 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-202ENST00000524773 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 TEPPQ6URK8 271 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 KIR3DL3Q8N743 410 aa10.83□□□□□ -0.68
CAPN1-202ENST00000524773 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
CAPN1-202ENST00000524773 ERVK-16P61578 105 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 MORN2Q502X0 79 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 Q56UQ5 140 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 NIT1Q86X76 327 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 C1orf174Q8IYL3 243 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 OR2Z1Q8NG97 314 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms