RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ZNF343Q6P1L6 599 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 TRAT1Q6PIZ9 186 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 DHRS11Q6UWP2 260 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 Q6ZR54 194 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF818PQ6ZRF7 136 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF833PQ6ZTB9 187 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 MOB1BQ7L9L4 216 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 LHFPL1Q86WI0 220 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 Q8N402 240 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 SIGLECL1Q8N7X8 197 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 C8orf31Q8N9H6 132 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR13C8Q8NGS7 320 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR13D1Q8NGV5 346 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR8U1Q8NH10 309 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR56B4Q8NH76 319 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR9G1Q8NH87 305 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 NANPQ8TBE9 248 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 ZFAND2BQ8WV99 257 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 RTN4IP1Q8WWV3 396 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-208ENST00000524652 GALMQ96C23 342 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 NABP2Q9BQ15 211 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
CSDE1-208ENST00000524652 OR2D2Q9H210 308 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 RIMS4Q9H426 269 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-208ENST00000524652 HRASLSQ9HDD0 168 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 IFT46Q9NQC8 304 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 CCL28Q9NRJ3 127 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 TNFRSF19Q9NS68 423 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 RDH8Q9NYR8 311 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 EHFQ9NZC4 300 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 GNG12Q9UBI6 72 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 RNF150Q9ULK6 438 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 TBC1D24Q9ULP9 559 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 TBL2Q9Y4P3 447 aaKnown RBP2.28□□□□□ -2.04
CSDE1-208ENST00000524652 HILPDAQ9Y5L2 63 aa2.28□□□□□ -2.04
CSDE1-208ENST00000524652 LINC00854A0A1B0GVQ3 168 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 VGLL3A8MV65 326 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 A8MZ25 164 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 H3BUX3 64 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TOR1AO14656 332 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ITGB1BP1O14713 200 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TNFSF12O43508 249 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 RBBP9O75884 186 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DFFBO76075 338 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DIRAS3O95661 229 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 RAB3DO95716 219 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 IGKV1-39P01597 117 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 IGLV2-23P01705 113 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 IGKV1-16P04430 117 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 IGKV1D-39P04432 117 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 KRTAP1-4P0C5Y4 121 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 OR5H8P0DN80 308 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 PTBP1P26599 531 aaKnown RBP eCLIP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 HTR1DP28221 377 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 GNRHRP30968 328 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DUTP33316 252 aaKnown RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 S100A5P33763 92 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 RCVRNP35243 200 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 SRP14P37108 136 aaKnown RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TALDO1P37837 337 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 RANBP1P43487 201 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 KIR2DS4P43632 304 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 CBX5P45973 191 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 IER3P46695 156 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 CCR6P51684 374 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 PPP5CP53041 499 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TAS2R19P59542 299 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 FXYD4P59646 89 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ARPC4P59998 168 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 HERV-K104P61576 105 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF45Q02386 682 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 PNRC1Q12796 327 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 BAMBIQ13145 260 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 EBI3Q14213 229 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 KIR2DS1Q14954 304 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ARL6IP1Q15041 203 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 SLC9A3R2Q15599 337 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 FAM189A2Q15884 450 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 LY6EQ16553 131 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 Q3ZCU0 254 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 VAX1Q5SQQ9 334 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MINOS1Q5TGZ0 78 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 STEAP1BQ6NZ63 245 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 LINC00299Q6ZSB3 139 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM17Q86X19 198 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DRAM1Q8N682 238 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 Q8N6K4 173 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF645Q8N7E2 425 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MAPKAPK5-AS1Q8N8E1 139 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DRAXINQ8NBI3 349 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 OR51S1Q8NGJ8 323 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 OR5H2Q8NGV7 314 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 OR10J5Q8NHC4 309 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MARCH1Q8TCQ1 289 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 GIMAP1Q8WWP7 306 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM230Q96A57 120 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MOB3AQ96BX8 217 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MALSU1Q96EH3 234 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 SSX3Q99909 188 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms