RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TGOLN2O43493 480 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 XRCC3O43542 346 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 PGLYRP1O75594 196 aaPredicted RBP14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 JTBO76095 146 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 TRAPPC2P0DI81 140 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 TRAPPC2BP0DI82 140 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 MFAP2P55001 183 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 GDPD1Q8N9F7 314 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 MARC2Q969Z3 335 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 COMMD9Q9P000 198 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 ANAPC10Q9UM13 185 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 UFC1Q9Y3C8 167 aa14.01□□□□□ -0.17
PTP4A3-206ENST00000524028 LOC102724200A0A096LPH7 203 aaPredicted RBP14□□□□□ -0.17
PTP4A3-206ENST00000524028 MARCH11A6NNE9 402 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 PMP2P02689 132 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 RLN1P04808 185 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 SERPINE2P07093 398 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
PTP4A3-206ENST00000524028 HERV-K104P61576 105 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 ANKRD55Q3KP44 614 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 RBPMS2Q6ZRY4 209 aaKnown RBP14□□□□□ -0.17
PTP4A3-206ENST00000524028 VN1R17PQ8TDU5 208 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 MOB3AQ96BX8 217 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
PTP4A3-206ENST00000524028 ZNF2Q9BSG1 426 aaPredicted RBP14□□□□□ -0.17
PTP4A3-206ENST00000524028 IFT46Q9NQC8 304 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 NDUFA4L2Q9NRX3 87 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 THYN1Q9P016 225 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 NSG2Q9Y328 171 aa14□□□□□ -0.17
PTP4A3-206ENST00000524028 IGHV3-21A0A0B4J1V1 117 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 OR2T8A6NH00 312 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 TMEM127O75204 238 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 RPS19P39019 145 aaKnown RBP13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 LPAR6P43657 344 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 SLC25A24Q6NUK1 477 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 OR1L6Q8NGR2 347 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 FCAMRQ8WWV6 532 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 TMEM190Q8WZ59 177 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 C5orf66Q9H5L9 145 aa13.99□□□□□ -0.17
PTP4A3-206ENST00000524028 F8W735 103 aaPredicted RBP13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 KRASP01116 189 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 NAT1P18440 290 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 F2RP25116 425 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 TAS2R20P59543 309 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 KCTD21Q4G0X4 260 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 UBE2NLQ5JXB2 153 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 OR2C3Q8N628 320 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 OR1L8Q8NGR8 309 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 CHRDL1Q9BU40 450 aa13.98□□□□□ -0.17
PTP4A3-206ENST00000524028 G6PCP35575 357 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 ERVK-16P61578 105 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 THOC7Q6I9Y2 204 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 HSD17B13Q7Z5P4 300 aaPredicted RBP13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 LYSMD2Q8IV50 215 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 SCARB1Q8WTV0 552 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 BORCS5Q969J3 196 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 DGCR14Q96DF8 476 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 ZNF414Q96IQ9 312 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 HINT2Q9BX68 163 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 FXYD6Q9H0Q3 95 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 UBQLN2Q9UHD9 624 aa13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 F11RQ9Y624 299 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-206ENST00000524028 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 K7EIM0 57 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 ADMP35318 185 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 EWSR1Q01844 656 aaKnown RBP eCLIP13.96□□□□□ -0.171e-7■■■□□ 19.2
PTP4A3-206ENST00000524028 TMEM69Q5SWH9 247 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 CROCCP3Q8IVE0 287 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 OR5H2Q8NGV7 314 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 LSM10Q969L4 123 aaKnown RBP13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 YIPF6Q96EC8 236 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 BSCL2Q96G97 398 aaPredicted RBP13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 SPAG8Q99932 426 aaPredicted RBP13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 OR51B2Q9Y5P1 312 aa13.96□□□□□ -0.17
PTP4A3-206ENST00000524028 ALMS1Q8TCU4 4167 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 IGHV3OR16-8A0A075B7F1 116 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 TSPAN4O14817 238 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 CYB5BO43169 146 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 LSM3P62310 102 aaKnown RBP13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 SLC38A6Q8IZM9 456 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 CADM3Q8N126 398 aa13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 DAZ1Q9NQZ3 744 aaKnown RBP13.95□□□□□ -0.18
PTP4A3-206ENST00000524028 GPR31O00270 319 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 NDUFA4O00483 81 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 ZNF207O43670 478 aaKnown RBP13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 TAS2R46P59540 309 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 ODF3L2Q3SX64 289 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 SPSB3Q6PJ21 355 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 OR6F1Q8NGZ6 308 aa13.94□□□□□ -0.18
PTP4A3-206ENST00000524028 A0A0J9YWU9 116 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 SNAPC5O75971 98 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 HLA-DMAP28067 261 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 PRSS3P35030 304 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 HRH1P35367 487 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 PHLDA2Q53GA4 152 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 WFDC3Q8IUB2 231 aa13.93□□□□□ -0.18
PTP4A3-206ENST00000524028 CMTM1Q8IZ96 169 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms