RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 OR13C7P0DN81 318 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 CBLN1P23435 193 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 F2RP25116 425 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.343e-6■■■□□ 16.9
CTNNA1-240ENST00000523912 GNRHRP30968 328 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 TGFBR1P36897 503 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 TSPAN5P62079 268 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 NCS1P62166 190 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 LSM3P62310 102 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 CTF1Q16619 201 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 GPR107Q5VW38 600 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 LPCAT3Q6P1A2 487 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 DHRS11Q6UWP2 260 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 SLC38A6Q8IZM9 456 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 OR52B4Q8NGK2 314 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 OR6F1Q8NGZ6 308 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 VN1R17PQ8TDU5 208 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 SLC25A46Q96AG3 418 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 DGCR14Q96DF8 476 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 HINT2Q9BX68 163 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 SCPEP1Q9HB40 452 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 FKBP11Q9NYL4 201 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 PRNDQ9UKY0 176 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 ANAPC10Q9UM13 185 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 S4R3C0 116 aa6.69□□□□□ -1.34
CTNNA1-240ENST00000523912 RYR2Q92736 4967 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 ZNF785A8K8V0 405 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 TGOLN2O43493 480 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 PGLYRP1O75594 196 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 JTBO76095 146 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 CD7P09564 240 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 RPA2P15927 270 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 HLA-DMAP28067 261 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 RCVRNP35243 200 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 HRH1P35367 487 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 RPS19P39019 145 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 RFX2P48378 723 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 TMBIM6P55061 237 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 VBP1P61758 197 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 SPSB3Q6PJ21 355 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 BTNL8Q6UX41 500 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 ADAMTSL5Q6ZMM2 481 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 CLVS1Q8IUQ0 354 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 TMEM61Q8N0U2 210 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 CADM3Q8N126 398 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 DEFB125Q8N687 156 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 UXS1Q8NBZ7 420 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 OR5B3Q8NH48 314 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 CACNG8Q8WXS5 425 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 AP3S1Q92572 193 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 BSCL2Q96G97 398 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 TMEM56Q96MV1 263 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 CMTM3Q96MX0 182 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 ATP6V0BQ99437 205 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 GGTLC1Q9BX51 225 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 NAA50Q9GZZ1 169 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 MRPL27Q9P0M9 148 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 OR51B2Q9Y5P1 312 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 DMRT1Q9Y5R6 373 aa6.68□□□□□ -1.34
CTNNA1-240ENST00000523912 OR2T8A6NH00 312 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 CGB1A6NKQ9 187 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 SCAF4O95104 1147 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 KRASP01116 189 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 APOA1P02647 267 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 SERPINE2P07093 398 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 NAT1P18440 290 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 LPAR6P43657 344 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 ZNF585BQ52M93 769 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 Q56UQ5 140 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 LAMTOR1Q6IAA8 161 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 SLC25A24Q6NUK1 477 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 TMEM190Q8WZ59 177 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 SPAG8Q99932 426 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 FXYD6Q9H0Q3 95 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 HIPK2Q9H2X6 1198 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 RETNQ9HD89 108 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 FAM212BQ9NTI7 297 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 C21orf62Q9NYP8 219 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 COMMD3Q9UBI1 195 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 MLXQ9UH92 298 aa6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 F11RQ9Y624 299 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-240ENST00000523912 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 LOC102724200A0A096LPH7 203 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 TEX50A0A1B0GTY4 177 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 C15orf61A6NNL5 157 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 H3BMQ9 156 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 NDUFA4O00483 81 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 ATG12O94817 140 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 EIF4EP06730 217 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 BMI1P35226 326 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 G6PCP35575 357 aa6.66□□□□□ -1.34
CTNNA1-240ENST00000523912 APOC4P55056 127 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms