RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 Q8WTZ3 238 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 SKA2Q8WVK7 121 aaPredicted RBP1.4□□□□□ -2.19
PCM1-219ENST00000523540 ASB13Q8WXK3 278 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 DNAJC9Q8WXX5 260 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 C11orf40Q8WZ69 217 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 PPP1R2P1Q96PQ5 205 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 C2orf88Q9BSF0 95 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 MND1Q9BWT6 205 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 ENY2Q9NPA8 101 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 SPANXA1Q9NS26 97 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 DOK5Q9P104 306 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 OPTCQ9UBM4 332 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 UFC1Q9Y3C8 167 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 FAM135AQ9P2D6 1515 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 PPIP5K1Q6PFW1 1433 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 CD109Q6YHK3 1445 aa1.4□□□□□ -2.19
PCM1-219ENST00000523540 A0A1W2PP64 1363 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 MYH2Q9UKX2 1941 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 IGLV3-9A0A075B6K5 115 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 PRORSD1PA6NEY8 169 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 FAM159BA6NKW6 160 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 K7EP13 123 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 PDE6DO43924 150 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 OR7C1O76099 320 aaPredicted RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 RBP1P09455 135 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SMIM6P0DI80 62 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SULT1A3P0DMM9 295 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SULT1A4P0DMN0 295 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 ERP29P30040 261 aaKnown RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 OR1E2P47887 323 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 RAB13P51153 203 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 LINC00313P59037 77 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 NAA20P61599 178 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 HIST1H3AP68431 136 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 H3F3AP84243 136 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 IFITM2Q01629 132 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SMAGPQ0VAQ4 97 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 CDK10Q15131 360 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SURF2Q15527 256 aaPredicted RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 LRRC26Q2I0M4 334 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 OR10K2Q6IF99 312 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 HIST2H3AQ71DI3 136 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 GRINAQ7Z429 371 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 ZNF439Q8NDP4 499 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 OR1L8Q8NGR8 309 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 GRPEL2Q8TAA5 225 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 PPCDCQ96CD2 204 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 VPS25Q9BRG1 176 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 TCEAL7Q9BRU2 100 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 GINS3Q9BRX5 216 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 TPT1P8Q9HAU6 139 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 UBQLN4Q9NRR5 601 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 PRO2289Q9P1D8 64 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 DNAJC12Q9UKB3 198 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 UTP11Q9Y3A2 253 aaKnown RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.39□□□□□ -2.19
PCM1-219ENST00000523540 PRELID3BQ9Y3B1 194 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 ZCCHC11Q5TAX3 1644 aaKnown RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 CHD5Q8TDI0 1954 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 NAV1Q8NEY1 1877 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 RTEL1-TNFRSF6BF6WH68 1400 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 PIK3C2GO75747 1445 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SOGA1O94964 1423 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 NPATQ14207 1427 aa1.39□□□□□ -2.19
PCM1-219ENST00000523540 SMG6Q86US8 1419 aaKnown RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 YTHDC2Q9H6S0 1430 aaKnown RBP1.39□□□□□ -2.19
PCM1-219ENST00000523540 NALCNQ8IZF0 1738 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 A0A087WUJ7 227 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 UQCRHLA0A096LP55 91 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 EXOC1LA0A1B0GW35 172 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 PQLC2LA1A4F0 135 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 EVPLLA8MZ36 301 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 FAM25AB3EWG3 89 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 FAM25CB3EWG5 89 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 FAM25GB3EWG6 89 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 C5orf58C9J3I9 102 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 H3BPC8 53 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 SLC17A3O00476 420 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 TXNDC9O14530 226 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 DLEU1O43261 78 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 OR2J2O76002 312 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 IFNA10P01566 189 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 IGLV3-27P01718 113 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 UQCRHP07919 91 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CD79AP11912 226 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CYBAP13498 195 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 NPPCP23582 126 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CRHBPP24387 322 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 S100A7P31151 101 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 SDC4P31431 198 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CA5AP35218 305 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 AKR1C3P42330 323 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 TPI1P60174 286 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 RAB5BP61020 215 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 RHOBP62745 196 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 RSU1Q15404 277 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 TMEM128Q5BJH2 165 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 N4BP2L1Q5TBK1 243 aaPredicted RBP1.38□□□□□ -2.19
PCM1-219ENST00000523540 SAMD13Q5VXD3 122 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms