RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CSMD3Q7Z407 3707 aa9.33□□□□□ -0.92
VEGFA-223ENST00000523125 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
VEGFA-223ENST00000523125 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 A8MWP6 167 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 CD7P09564 240 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 RCVRNP35243 200 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 UCP3P55916 312 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 ERVK-16P61578 105 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 TSPAN5P62079 268 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 THOC7Q6I9Y2 204 aaKnown RBP9.32□□□□□ -0.92
VEGFA-223ENST00000523125 UNQ9165/PRO28630Q6UXU0 137 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 LAX1Q8IWV1 398 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 GDPD1Q8N9F7 314 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 CITED4Q96RK1 184 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 FAM212BQ9NTI7 297 aaPredicted RBP9.32□□□□□ -0.92
VEGFA-223ENST00000523125 TECRQ9NZ01 308 aaKnown RBP9.32□□□□□ -0.92
VEGFA-223ENST00000523125 MLXQ9UH92 298 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 SELENOKQ9Y6D0 94 aa9.32□□□□□ -0.92
VEGFA-223ENST00000523125 ZNF320A2RRD8 509 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 M0QYG6 137 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 PTBP1P26599 531 aaKnown RBP eCLIP9.31□□□□□ -0.92
VEGFA-223ENST00000523125 GPR183P32249 361 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 CD81P60033 236 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 FAM106AQ4KMX7 169 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 TM4SF20Q53R12 229 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 CASC10Q5T4H9 136 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 GPR107Q5VW38 600 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 LPCAT3Q6P1A2 487 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 VN1R17PQ8TDU5 208 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 DYNLRB2Q8TF09 96 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-223ENST00000523125 SEC22AQ96IW7 307 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 NEURL2Q9BR09 285 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 EDA2RQ9HAV5 297 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 PLEKHA3Q9HB20 300 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 KLK11Q9UBX7 282 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
VEGFA-223ENST00000523125 SNAPC5O75971 98 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 C8orf88P0DMB2 117 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 ZNF182P17025 639 aaPredicted RBP9.3□□□□□ -0.92
VEGFA-223ENST00000523125 MZT2AQ6P582 158 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 HSD17B13Q7Z5P4 300 aaPredicted RBP9.3□□□□□ -0.92
VEGFA-223ENST00000523125 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 UXS1Q8NBZ7 420 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 OR52I2Q8NH67 350 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 THYN1Q9P016 225 aa9.3□□□□□ -0.92
VEGFA-223ENST00000523125 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
VEGFA-223ENST00000523125 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 RBMY1BA6NDE4 496 aaKnown RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 RBMY1EA6NEQ0 496 aaKnown RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 C15orf61A6NNL5 157 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 FAM25AB3EWG3 89 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 FAM25CB3EWG5 89 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 FAM25GB3EWG6 89 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 TGOLN2O43493 480 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 RBMY1DP0C7P1 496 aaKnown RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 ALDH3B2P48448 385 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 GUCA2BQ16661 112 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 RNASE12Q5GAN4 147 aaKnown RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 PLET1Q6UQ28 207 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 OR5B3Q8NH48 314 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 LSM10Q969L4 123 aaKnown RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 ZNF414Q96IQ9 312 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 HINT2Q9BX68 163 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 ZNF436Q9C0F3 470 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-223ENST00000523125 MIXL1Q9H2W2 232 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 SLC2A8Q9NY64 477 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 MTFP1Q9UDX5 166 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
VEGFA-223ENST00000523125 DYNC2H1Q8NCM8 4307 aaKnown RBP9.28□□□□□ -0.92
VEGFA-223ENST00000523125 IGHV3-21A0A0B4J1V1 117 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 K7EIM0 57 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 TPPPO94811 219 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 CD3DP04234 171 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 LYL1P12980 280 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 ADMP35318 185 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 ELLP55199 621 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-223ENST00000523125 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-223ENST00000523125 OR4D10Q8NGI6 311 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 AP3S1Q92572 193 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
VEGFA-223ENST00000523125 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms