RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 VKORC1L1Q8N0U8 176 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 LRTM2Q8N967 370 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 DMBX1Q8NFW5 382 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 DMRT1Q9Y5R6 373 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 LGALS9O00182 355 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 SERPINE2P07093 398 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 PRCDQ00LT1 54 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 KLF5Q13887 457 aaPredicted RBP7.29□□□□□ -1.24
CLK4-209ENST00000521621 PYDC2Q56P42 97 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 KHDC1LQ5JSQ8 128 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 IDO2Q6ZQW0 420 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 TOMM5Q8N4H5 51 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 OR2K2Q8NGT1 345 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 MARCH1Q8TCQ1 289 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 CXorf58Q96LI9 332 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 TP53RKQ96S44 253 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 THYN1Q9P016 225 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 PEF1Q9UBV8 284 aaKnown RBP7.29□□□□□ -1.24
CLK4-209ENST00000521621 SLC25A6P12236 298 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 ATP5G2Q06055 141 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 OR51S1Q8NGJ8 323 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 DPF1Q92782 380 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 CCDC32Q9BV29 185 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 OR51B2Q9Y5P1 312 aa7.29□□□□□ -1.24
CLK4-209ENST00000521621 E7EUB6 86 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 MECP2P51608 486 aaKnown RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 HSPE1P61604 102 aaKnown RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 H2BFWTQ7Z2G1 175 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 GLYATL2Q8WU03 294 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 SDHCQ99643 169 aaPredicted RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 TXN2Q99757 166 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 AKIP1Q9NQ31 210 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 F11RQ9Y624 299 aaKnown RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 TRAV3A0A0B4J244 114 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 G3V4G9 280 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 IGKV1-5P01602 117 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 HLA-AP01891 365 aaKnown RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 G6PCP35575 357 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 ATP5IP56385 69 aaPredicted RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 RHOGP84095 191 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 OR5T1Q8NG75 326 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 OR1P1Q8NH06 330 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 S100ZQ8WXG8 99 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 RBPMSQ93062 196 aaKnown RBP7.28□□□□□ -1.24
CLK4-209ENST00000521621 TMEM230Q96A57 120 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 KCNIP3Q9Y2W7 256 aa7.28□□□□□ -1.24
CLK4-209ENST00000521621 IGHV4OR15-8A0A075B7B6 117 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 A0A087WW49 117 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 PPP5CP53041 499 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 TMEM187Q14656 261 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 BSXQ3C1V8 233 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 SCGB2B2Q4G0G5 96 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 RNASE12Q5GAN4 147 aaKnown RBP7.27□□□□□ -1.25
CLK4-209ENST00000521621 GPHB5Q86YW7 130 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 SGPP2Q8IWX5 399 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 SELENOHQ8IZQ5 122 aaKnown RBP7.27□□□□□ -1.25
CLK4-209ENST00000521621 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 EEF1AKMT3Q96AZ1 226 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 GAR1Q9NY12 217 aaKnown RBP7.27□□□□□ -1.25
CLK4-209ENST00000521621 OVOL1O14753 267 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 KRASP01116 189 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 ANXA3P12429 323 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 IGLL1P15814 213 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 TMEM128Q5BJH2 165 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 C10orf55Q5SWW7 151 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 OR4A16Q8NH70 328 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 PTTG2Q9NZH5 202 aa7.27□□□□□ -1.25
CLK4-209ENST00000521621 ELLP55199 621 aaPredicted RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 WT1-ASQ06250 92 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 EXOSC2Q13868 293 aaKnown RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 RBMS2Q15434 407 aaKnown RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 TATDN3Q17R31 274 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 HIST2H2BDQ6DRA6 164 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 SSX9Q7RTT3 188 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 ELOVL1Q9BW60 279 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 ZNF436Q9C0F3 470 aaPredicted RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 A0A0B4J293 547 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 A0A0B4J2A0 478 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 A8MWP6 167 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 LY86O95711 162 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 AREGP15514 252 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 SUPT4H1P63272 117 aaKnown RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 ZNF502Q8TBZ5 544 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 DCUN1D4Q92564 292 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 MS4A10Q96PG2 267 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 ALX4Q9H161 411 aaPredicted RBP7.26□□□□□ -1.25
CLK4-209ENST00000521621 SHPKQ9UHJ6 478 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 FBXL7Q9UJT9 491 aa7.26□□□□□ -1.25
CLK4-209ENST00000521621 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 HMX3A6NHT5 357 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 CORTO00230 105 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 RBMXL2O75526 392 aaKnown RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 NDUFB6O95139 128 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 OR5AC1P0C628 307 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms