RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GPX8Q8TED1 209 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 SGK3Q96BR1 496 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NIPSNAP1Q9BPW8 284 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 TSSK6Q9BXA6 273 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 BARHL1Q9BZE3 327 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 MED28Q9H204 178 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 TMEM133Q9H2Q1 129 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 MIXL1Q9H2W2 232 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 RGCCQ9H4X1 137 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 AMBNQ9NP70 447 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NUDT15Q9NV35 164 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 MCUBQ9NWR8 336 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 MRPL22Q9NWU5 206 aaKnown RBP2.73□□□□□ -1.97
VPS13B-208ENST00000521037 IL20Q9NYY1 176 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CALML5Q9NZT1 146 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 THYN1Q9P016 225 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 DPM3Q9P2X0 92 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NUFIP1Q9UHK0 495 aaKnown RBP2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CYB5R1Q9UHQ9 305 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 PRELID1Q9Y255 219 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 HSPB11Q9Y547 144 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NUBP2Q9Y5Y2 271 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ALG5Q9Y673 324 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CDH10Q9Y6N8 788 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 A0A1B0GUV1 79 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 A0A1W2PRG6 482 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 NAP1L6A6NFF2 107 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RFPL4AA6NLU0 287 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 LEUTXA8MZ59 168 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RFPL4AL1F8VTS6 287 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 LINC01619G3V211 115 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 BUB1B-PAK6H3BSN5 160 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 BHLHE40O14503 412 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 GAPDHP04406 335 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR9G9P0C7N8 305 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 PRKACBP22694 351 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 HTR1DP28221 377 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 AQP1P29972 269 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 DAP3P51398 398 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 CRISP3P54108 245 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TCTAP57738 103 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 FXYD6P3P58550 94 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 AP3S2P59780 193 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RPL8P62917 257 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 SLC35B1P78383 322 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 MRPS10P82664 201 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RPL36AP83881 106 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 CDK5Q00535 292 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 PAX5Q02548 391 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TSPAN31Q12999 210 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 LAGE3Q14657 143 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 GINS1Q14691 196 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 GRK1Q15835 563 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 PLCXD3Q63HM9 321 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR8G2PQ6IF36 304 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RPL13AP3Q6NVV1 102 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 CNIH2Q6PI25 160 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TEX261Q6UWH6 196 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RASSF6Q6ZTQ3 369 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OAFQ86UD1 273 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 C9orf62Q8N4C0 152 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 MS4A15Q8N5U1 240 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 POM121L12Q8N7R1 296 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 SAMD12Q8N8I0 201 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TMEM104Q8NE00 496 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR1B1Q8NGR6 318 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR2T27Q8NH04 317 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR56B4Q8NH76 319 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 LHFPL5Q8TAF8 219 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TEX47Q8TBZ9 253 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 LRRC20Q8TCA0 184 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 HAVCR2Q8TDQ0 301 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 GNPDA2Q8TDQ7 276 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 IL1F10Q8WWZ1 152 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR5P3Q8WZ94 311 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 MRPL48Q96GC5 212 aaKnown RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF488Q96MN9 340 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 ERMAPQ96PL5 475 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-208ENST00000521037 C20orf24Q9BUV8 137 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 HDHD2Q9H0R4 259 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR51J1Q9H342 316 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 OR51I2Q9H344 312 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RNF167Q9H6Y7 350 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TUBA4BQ9H853 241 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 HES4Q9HCC6 221 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 ABRACLQ9P1F3 81 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 KIF25Q9UIL4 384 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 SCP2D1Q9UJQ7 156 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 VSIG4Q9Y279 399 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 TP53TG1Q9Y2A0 90 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 RHBDD3Q9Y3P4 386 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 U3KQ87 197 aa2.72□□□□□ -1.97
VPS13B-208ENST00000521037 MEIKINA0A087WXM9 373 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 TRAV1-2A0A0B4J238 106 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LOC105371267A0A1B0GV96 52 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 K7N7A8 449 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms