RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR10W1Q8NGF6 305 aa8.37□□□□□ -1.07
MCF2-209ENST00000520602 OR1B1Q8NGR6 318 aa8.37□□□□□ -1.07
MCF2-209ENST00000520602 VKORC1Q9BQB6 163 aa8.37□□□□□ -1.07
MCF2-209ENST00000520602 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
MCF2-209ENST00000520602 IGLV3-9A0A075B6K5 115 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 C15orf61A6NNL5 157 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 LY6HO94772 140 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 ATP5G3P48201 142 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 SSTP61278 116 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 GUSBP1Q15486 140 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 MMDQ15546 238 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.36□□□□□ -1.07
MCF2-209ENST00000520602 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 ZNF835Q9Y2P0 537 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 C15orf62A8K5M9 175 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 TMEM178BH3BS89 294 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 PDE6DO43924 150 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 UBE2G1P62253 170 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 LY6DQ14210 128 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 C10orf55Q5SWW7 151 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 LPAR2Q9HBW0 351 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 K7ENP7 123 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 F2RL2O00254 374 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 NDUFA2O43678 99 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 LINC00869P0C866 280 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 CT45A6P0DMU7 189 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 CT45A5P0DMU8 189 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 CT45A7P0DMV0 189 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 GNG4P50150 75 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 DLX1P56177 255 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 RELBQ01201 579 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 MEF2CQ06413 473 aaPredicted RBP8.36□□□□□ -1.07
MCF2-209ENST00000520602 IGF2-ASQ6U949 168 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 NPIPB3Q92617 1050 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 PCGF1Q9BSM1 259 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 KIAA1549Q9HCM3 1950 aa8.36□□□□□ -1.07
MCF2-209ENST00000520602 C1QTNF9BB2RNN3 333 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 CLN5O75503 358 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 USF1P22415 310 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 MC5RP33032 325 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 RPL27AP46776 148 aaKnown RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 RND2P52198 227 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 C17orf58Q2M2W7 97 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 SPNS3Q6ZMD2 512 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 PNKDQ8N490 385 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 Q8WTZ3 238 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 DAZAP1Q96EP5 407 aaKnown RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 NABP2Q9BQ15 211 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 UPK2O00526 184 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 TCL1AP56279 114 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 NUP37Q8NFH4 326 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 OSR1Q8TAX0 266 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 CMTM2Q8TAZ6 248 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 SAMD10Q9BYL1 202 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 ZNF705FA8MVS1 300 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 E7EQL1 145 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 ZNF705DP0CH99 300 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 ZNF705BP0CI00 300 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 BAGE3Q86Y29 109 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 BAGE2Q86Y30 109 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 OR10G8Q8NGN5 311 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 SGMS2Q8NHU3 365 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 C5orf30Q96GV9 206 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 METTL1Q9UBP6 276 aaKnown RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 FUT9Q9Y231 359 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 FAM208BQ5VWN6 2430 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 CFHR2P36980 270 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 LYZP61626 148 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 USF2Q15853 346 aaPredicted RBP8.35□□□□□ -1.07
MCF2-209ENST00000520602 SDF2L1Q9HCN8 221 aa8.35□□□□□ -1.07
MCF2-209ENST00000520602 HELTA6NFD8 242 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 PGPEP1LA6NFU8 196 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 TMEM250H0YL14 139 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 TGOLN2O43493 480 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 IGKV1D-33P01593 117 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 IGKV1-33P01594 117 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 HABP2Q14520 560 aaPredicted RBP8.34□□□□□ -1.07
MCF2-209ENST00000520602 ZNF726P1Q15940 193 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 MLANAQ16655 118 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 HEPN1Q6WQI6 88 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 LINC00518Q8N0U6 118 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 COL25A1Q9BXS0 654 aaPredicted RBP8.34□□□□□ -1.07
MCF2-209ENST00000520602 SEBOXQ9HB31 216 aaPredicted RBP8.34□□□□□ -1.07
MCF2-209ENST00000520602 ACACBO00763 2458 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 XKRY2A2RUG3 117 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 LOXL3P58215 753 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
MCF2-209ENST00000520602 C10orf91Q5T1B1 145 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 C10orf113Q5VZT2 155 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 OR2T6Q8NHC8 308 aa8.34□□□□□ -1.07
MCF2-209ENST00000520602 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms