RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 C12orf77C9JDV5 145 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HSD17B6O14756 317 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 SOCS1O15524 211 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BKO60814 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 LY86O95711 162 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 NAPSAO96009 420 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BJP06899 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 SRP19P09132 144 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 OR5H8P0DN80 308 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 RAB4AP20338 218 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BOP23527 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BBP33778 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 SSTR5P35346 364 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 KIR2DS2P43631 304 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 IER3P46695 156 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 GPR12P47775 334 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 GNG10P50151 68 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 RND2P52198 227 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BDP58876 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BCP62807 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF816Q0VGE8 651 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 CATR1Q13166 79 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 ELOBQ15370 118 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 MSMO1Q15800 293 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST2H2BEQ16778 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 LTC4SQ16873 150 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF674Q2M3X9 581 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 IAH1Q2TAA2 248 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 DEFB112Q30KQ8 113 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 KHDC3LQ587J8 217 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 PLAC9Q5JTB6 97 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 GGNBP1Q5YKI7 109 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 DUX4L9Q6RFH8 374 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 THNSL2Q86YJ6 484 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 MRPL41Q8IXM3 137 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 CMTM1Q8IZ96 169 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 LYG1Q8N1E2 194 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 Q8N7P7 452 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 C3orf56Q8N813 242 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 LRTM2Q8N967 370 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 OR13A1Q8NGR1 328 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 OR2T10Q8NGZ9 312 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 PLPPR1Q8TBJ4 325 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 MRPL30Q8TCC3 161 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 CD300LFQ8TDQ1 290 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 AJUBAQ96IF1 538 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 SSX3Q99909 188 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 EIF5A2Q9GZV4 153 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 WFDC1Q9HC57 220 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 Q9N2K0 584 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM242Q9NWH2 141 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 GSKIPQ9P0R6 139 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 AK3Q9UIJ7 227 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 KCNIP3Q9Y2W7 256 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 DOCK11Q5JSL3 2073 aa4.58□□□□□ -1.68
CTNNA1-220ENST00000520260 A0A1W2PP11 408 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RBFOX3A6NFN3 312 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 H3BQ15 152 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 H3BUX3 64 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 PHOX2AO14813 284 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TCAPO15273 167 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 CYB5BO43169 146 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 NDUFA7O95182 113 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 IGLV1-47P01700 117 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 HSPB1P04792 205 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 CXCL1P09341 107 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM11P17152 192 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 FGF7P21781 194 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 OMGP23515 440 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 CD1BP29016 333 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TAGLN2P37802 199 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 DLX6P56179 175 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM50BP56557 158 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC35B1P78383 322 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 NHLH2Q02577 135 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF616Q08AN1 781 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 GAMTQ14353 236 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 JOSD1Q15040 202 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 PLGLAQ15195 96 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 KLF17Q5JT82 389 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 COA6Q5JTJ3 125 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF506Q5JVG8 444 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 CDPF1Q6NVV7 123 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 SPSB3Q6PJ21 355 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 DPPA3Q6W0C5 159 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC25A48Q6ZT89 311 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 MOB3BQ86TA1 216 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 MRPL52Q86TS9 123 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 FOXRED2Q8IWF2 684 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 SGPP2Q8IWX5 399 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RFESDQ8TAC1 157 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms