RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 FOXA2Q9Y261 457 aaPredicted RBP3.65□□□□□ -1.83
PABPC1-212ENST00000519622 BOD1L1Q8NFC6 3051 aa3.65□□□□□ -1.83
PABPC1-212ENST00000519622 ATMQ13315 3056 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 HEATR1Q9H583 2144 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 APC2O95996 2303 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 HRNRQ86YZ3 2850 aaPredicted RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 ARFGEF3Q5TH69 2177 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 IGKV1OR2-108A0A075B7D4 117 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 TGIF2-C20orf24A0A0A6YYL0 155 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PIGBOS1A0A0B4J2F0 54 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CTXND1A0A1B0GTU2 59 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PSMB11A5LHX3 300 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 E7EQL1 145 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 H7C2Y5 167 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 K7ENP7 123 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 KLK10O43240 276 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 SPINT2O43291 252 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 FCGR3BO75015 233 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 HPRT1P00492 218 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 IFNA5P01569 189 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 IGHV3-7P01780 117 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CRYABP02511 175 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 GYPAP02724 150 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 IFNA4P05014 189 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PFN1P07737 140 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 LINC00869P0C866 280 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CT45A6P0DMU7 189 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CT45A5P0DMU8 189 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CT45A7P0DMV0 189 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 GZMHP20718 246 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 FGF7P21781 194 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 S100GP29377 79 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 GPR12P47775 334 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 SPCS3P61009 180 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 DLK1P80370 383 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 TNFAIP6P98066 277 aaPredicted RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 BSPH1Q075Z2 132 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CATR1Q13166 79 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 ATP6V1FQ16864 119 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 LTC4SQ16873 150 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 KRTCAP3Q53RY4 240 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PRAMEF5Q5TYX0 476 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 SPATA31B1PQ5VZV4 182 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PVRIGQ6DKI7 326 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 OR8G2PQ6IF36 304 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 OR4A47Q6IF82 309 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 CYP2G1PQ6ZSU1 146 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 ZNF833PQ6ZTB9 187 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 FAM24BQ8N5W8 94 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 ZNF114Q8NC26 417 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 ABHD5Q8WTS1 349 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 NEUROG1Q92886 237 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 DAZAP1Q96EP5 407 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 P2RX4Q99571 388 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 EIF5A2Q9GZV4 153 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 FAM234AQ9H0X4 552 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 GNG13Q9P2W3 67 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 RNF7Q9UBF6 113 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 METTL1Q9UBP6 276 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 PUS1Q9Y606 427 aaKnown RBP eCLIP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 COX11Q9Y6N1 276 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 DOCK11Q5JSL3 2073 aa3.64□□□□□ -1.83
PABPC1-212ENST00000519622 URB1O60287 2271 aaKnown RBP3.64□□□□□ -1.83
PABPC1-212ENST00000519622 DCHS1Q96JQ0 3298 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ZFP92A6NM28 416 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ZNF729A6NN14 1252 aaPredicted RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 C17orf100A8MU93 164 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 E7EUB6 86 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 INS-IGF2F8WCM5 200 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 TMEM178BH3BS89 294 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 M0R036 132 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 UPK2O00526 184 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 HMGB3O15347 200 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 CLN5O75503 358 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 KBTBD11O94819 623 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 OR2C1O95371 312 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 FSTL3O95633 263 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 IGLV2-23P01705 113 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 CRYAAP02489 173 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 IGKV1-16P04430 117 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RNASE2P10153 161 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 CCL3L1P16619 93 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RPL35P42766 123 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 KIR2DS2P43631 304 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ZNF137PP52743 207 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RPL23P62829 140 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 GNB1P62873 340 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 HBG1P69891 147 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 HBG2P69892 147 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 CTAG1AP78358 180 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 TLE4Q04727 773 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 MZT1Q08AG7 82 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 DIAPH2-AS1Q14236 149 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 FFAR4Q5NUL3 377 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SUMO4Q6EEV6 95 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms