RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TEX50	A0A1B0GTY4	177 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	ARL3	P36405	182 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	RND3	P61587	244 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	MEF2D	Q14814	521 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	H2BFWT	Q7Z2G1	175 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885		Q8N402	240 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	GDPD1	Q8N9F7	314 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	CCDC71L	Q8N9Z2	235 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	DYNC2LI1	Q8TCX1	351 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	DIRAS2	Q96HU8	199 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	HINT2	Q9BX68	163 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	MIXL1	Q9H2W2	232 aa		18.46	■□□□□ 0.55
CNOT7-204	ENST00000518885	CGB1	A6NKQ9	187 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	CTDSP2	O14595	271 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	NDUFB8	O95169	186 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	RAB3D	O95716	219 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	IL18	Q14116	193 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	FAM106A	Q4KMX7	169 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	STEAP1B	Q6NZ63	245 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	OR4A16	Q8NH70	328 aa		18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	C6orf62	Q9GZU0	229 aa	Predicted RBP	18.45	■□□□□ 0.54
CNOT7-204	ENST00000518885	CD74	P04233	296 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	CSN3	P07498	182 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	OR13C7	P0DN81	318 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	MECP2	P51608	486 aa	Known RBP	18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	SCGB2B2	Q4G0G5	96 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	CLEC19A	Q6UXS0	136 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	C19orf35	Q6ZS72	473 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	LHFPL1	Q86WI0	220 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	SGPP2	Q8IWX5	399 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	TERB2	Q8NHR7	220 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	SMIM4	Q8WVI0	70 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	NDUFA4L2	Q9NRX3	87 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	COPZ2	Q9P299	210 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	RSL24D1	Q9UHA3	163 aa	Known RBP	18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	COL7A1	Q02388	2944 aa		18.44	■□□□□ 0.54
CNOT7-204	ENST00000518885	PPP5D1	E7EU14	171 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	LGALS9	O00182	355 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	CTDSPL	O15194	276 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	B3GALNT1	O75752	331 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	PIGP	P57054	158 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	IL34	Q6ZMJ4	242 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	GTSCR1	Q86UQ5	136 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	GPHB5	Q86YW7	130 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	DYNLRB2	Q8TF09	96 aa		18.43	■□□□□ 0.54
CNOT7-204	ENST00000518885	C15orf61	A6NNL5	157 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	DISC1	C4P0D8	188 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	PPP5C	P53041	499 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	HAPLN4	Q86UW8	402 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	OR10W1	Q8NGF6	305 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	VN1R17P	Q8TDU5	208 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	ISOC1	Q96CN7	298 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885	TMEM14B	Q9NUH8	114 aa		18.42	■□□□□ 0.54
CNOT7-204	ENST00000518885		H3BMQ9	156 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	SLC25A24	Q6NUK1	477 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	SEC22A	Q96IW7	307 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	CCDC140	Q96MF4	163 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	NSG2	Q9Y328	171 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	F11R	Q9Y624	299 aa	Known RBP	18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	SORL1	Q92673	2214 aa		18.41	■□□□□ 0.54
CNOT7-204	ENST00000518885	OR2C1	O95371	312 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	IGHV3-23	P01764	117 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	CLEC3B	P05452	202 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	AKAIN1	P0CW23	69 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	WT1-AS	Q06250	92 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	C11orf87	Q6NUJ2	197 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	MRGPRF	Q96AM1	343 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	ATP6V0B	Q99437	205 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	PALMD	Q9NP74	551 aa		18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	TECR	Q9NZ01	308 aa	Known RBP	18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	C14orf166	Q9Y224	244 aa	Known RBP	18.4	■□□□□ 0.54
CNOT7-204	ENST00000518885	C3orf85	A0A1B0GTC6	90 aa		18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885	AKR1C2	P52895	323 aa		18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885	SURF2	Q15527	256 aa	Predicted RBP	18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885	MCFD2	Q8NI22	146 aa		18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885	DMRT1	Q9Y5R6	373 aa		18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885		U3KQK5	164 aa		18.39	■□□□□ 0.53
CNOT7-204	ENST00000518885	ZNF320	A2RRD8	509 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	MFSD2B	A6NFX1	497 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	CTSD	P07339	412 aa	Predicted RBP	18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	PI3	P19957	117 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	TRIM16L	Q309B1	348 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	PLET1	Q6UQ28	207 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	ZNF502	Q8TBZ5	544 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	WWC2-AS2	Q96NR7	200 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	PRRT1	Q99946	306 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	GAR1	Q9NY12	217 aa	Known RBP	18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885		S4R3C0	116 aa		18.38	■□□□□ 0.53
CNOT7-204	ENST00000518885	CCDC160	A6NGH7	325 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	C2orf70	A6NJV1	201 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	HLA-A	P01891	365 aa	Known RBP	18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	GPR183	P32249	361 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	OR4D10	Q8NGI6	311 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	OR13C8	Q8NGS7	320 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	RRNAD1	Q96FB5	475 aa	Known RBP	18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	PDCD10	Q9BUL8	212 aa		18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	SLIRP	Q9GZT3	109 aa	Known RBP	18.37	■□□□□ 0.53
CNOT7-204	ENST00000518885	FABP12	A6NFH5	140 aa		18.36	■□□□□ 0.53
CNOT7-204	ENST00000518885		A8MWP6	167 aa		18.36	■□□□□ 0.53
CNOT7-204	ENST00000518885	GSTZ1	O43708	216 aa	Predicted RBP	18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms