RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 OR51J1Q9H342 316 aa4.57□□□□□ -1.68
PABPC1-207ENST00000518716 MOB1AQ9H8S9 216 aa4.57□□□□□ -1.68
PABPC1-207ENST00000518716 SPAG4Q9NPE6 437 aa4.57□□□□□ -1.68
PABPC1-207ENST00000518716 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.57□□□□□ -1.68
PABPC1-207ENST00000518716 AMMECR1Q9Y4X0 333 aaPredicted RBP4.57□□□□□ -1.68
PABPC1-207ENST00000518716 R4GMQ9 66 aa4.57□□□□□ -1.68
PABPC1-207ENST00000518716 HSPG2P98160 4391 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 TRGV11A0A075B6L2 103 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 IGHV3-72A0A0B4J1Y9 119 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 A0A0U1RRA0 63 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 NCBP2LA6PVI3 153 aaKnown RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 ZNF736B4DX44 427 aaPredicted RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 USP17L23D6RBM5 183 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 F5H697 171 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 G3V318 75 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 TEX46H3BTG2 121 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 SH2D1BO14796 132 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 ORC5O43913 435 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 SOX15O60248 233 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 TSPAN13O95857 204 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 MT-CO2P00403 227 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 IGHV3-7P01780 117 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 OR8U9P0C7N5 309 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 OR5H8P0DN80 308 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 PMCHP20382 165 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 VDAC1P21796 283 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 NFYBP25208 207 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 HTR1FP30939 366 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 ID1P41134 155 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 AKR1C3P42330 323 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 DHODHQ02127 395 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 GINS1Q14691 196 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 ZNF846Q147U1 533 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 SRSF7Q16629 238 aaKnown RBP eCLIP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 FAM71F2Q6NXP2 309 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 PACRGLQ8N7B6 248 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 LFNGQ8NES3 379 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 OR13A1Q8NGR1 328 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 OR10X1Q8NGY0 326 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 OR2T10Q8NGZ9 312 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 GATAD1Q8WUU5 269 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 ARPC1AQ92747 370 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 GHSRQ92847 366 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 C10orf35Q96D05 121 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 NARS2Q96I59 477 aaKnown RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 FEVQ99581 238 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 APOL4Q9BPW4 351 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 SLC25A32Q9H2D1 315 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 CALYQ9NYX4 217 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 IDI2-AS1Q9NZ38 188 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 METTL1Q9UBP6 276 aaKnown RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
PABPC1-207ENST00000518716 AP4S1Q9Y587 144 aa4.56□□□□□ -1.68
PABPC1-207ENST00000518716 IGHV4OR15-8A0A075B7B6 117 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 A0A087WW49 117 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 LINC01619G3V211 115 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 H3BSH0 61 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 EI24O14681 340 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 HSD17B6O14756 317 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 NBR2O15453 112 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 CYB5BO43169 146 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 SSNA1O43805 119 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 EIF3GO75821 320 aaKnown RBP eCLIP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 MOSP00540 346 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 HLA-AP01891 365 aaKnown RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 ORM1P02763 201 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 GAPDHP04406 335 aaKnown RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 C8orf88P0DMB2 117 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 FUT3P21217 361 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 HTR2CP28335 458 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 REG1BP48304 166 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 ZNF137PP52743 207 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 OR2B8PP59922 312 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RAB5BP61020 215 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 PPP3R1P63098 170 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 TNXAQ16473 311 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 GUCA2BQ16661 112 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 ZFP69Q49AA0 526 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 BCL2L15Q5TBC7 163 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RSBN1Q5VWQ0 802 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 KCNIP4Q6PIL6 250 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 ZNF322Q6U7Q0 402 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 HAPLN4Q86UW8 402 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 APRG1Q8IVJ8 170 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 SGPP2Q8IWX5 399 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RPP25LQ8N5L8 163 aaKnown RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 DMBX1Q8NFW5 382 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RTN4IP1Q8WWV3 396 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 ASB13Q8WXK3 278 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 DDB2Q92466 427 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 TMEM106AQ96A25 262 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 BORCS8Q96FH0 119 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 CNN2Q99439 309 aaKnown RBP4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RASL11BQ9BPW5 248 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 RETNQ9HD89 108 aa4.55□□□□□ -1.68
PABPC1-207ENST00000518716 EXOSC4Q9NPD3 245 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms