RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
CCDC6-203ENST00000518638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.44□□□□□ -1.7
CCDC6-203ENST00000518638 TRAV10A0A0B4J240 114 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 TRBV5-5A0A0J9YX44 114 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 GNGT2O14610 69 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 CREBL2O60519 120 aaPredicted RBP4.44□□□□□ -1.7
CCDC6-203ENST00000518638 CST1P01037 141 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 IGLV2-11P01706 119 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 APOA2P02652 100 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 AMBPP02760 352 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 ZNF735P0CB33 412 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 GTF2F2P13984 249 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 RAB3AP20336 220 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 ATP5G2Q06055 141 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 OPCMLQ14982 345 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 PSG5Q15238 335 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 RBMY1FQ15415 496 aaKnown RBP4.44□□□□□ -1.7
CCDC6-203ENST00000518638 SLC25A30Q5SVS4 291 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 LIPKQ5VXJ0 399 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 C5orf24Q7Z6I8 188 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 TMEM179BQ7Z7N9 219 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 PDPNQ86YL7 162 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 GPHB5Q86YW7 130 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 GAPTQ8N292 157 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 OR10H4Q8NGA5 316 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 CLCC1Q96S66 551 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 PHB2Q99623 299 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 TAF9BQ9HBM6 251 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 SCRT2Q9NQ03 307 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 ABRACLQ9P1F3 81 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 EXOSC1Q9Y3B2 195 aaKnown RBP4.44□□□□□ -1.7
CCDC6-203ENST00000518638 HSPG2P98160 4391 aa4.44□□□□□ -1.7
CCDC6-203ENST00000518638 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 IGHV4-4A0A075B6R2 117 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR4C46A6NHA9 309 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 MPTX1A8MV57 137 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 GABRPO00591 440 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 ITGB1BP1O14713 200 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 GEMIN2O14893 280 aaKnown RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 PRKYO43930 277 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 GPX5O75715 221 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 MAS1P04201 325 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 GLAP06280 429 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 CD2P06729 351 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 HTR1AP08908 422 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 PPP1CCP36873 323 aaKnown RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 CMC4P56277 68 aaPredicted RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 RHOGP84095 191 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 TMED1Q13445 227 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 AADACL4Q5VUY2 407 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 TMEM236Q5W0B7 351 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 DMKNQ6E0U4 476 aaPredicted RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 ASCL4Q6XD76 172 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 SSX6Q7RTT6 188 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 NECAP1Q8NC96 275 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR6M1Q8NGM8 313 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR10AC1Q8NH08 325 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR4K15Q8NH41 348 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 OR1L1Q8NH94 360 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 KCNG3Q8TAE7 436 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 GIMAP1Q8WWP7 306 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 C17orf77Q96MU5 243 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 TBX5Q99593 518 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 ZNF230Q9UIE0 474 aaPredicted RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 RPL36Q9Y3U8 105 aaKnown RBP4.43□□□□□ -1.7
CCDC6-203ENST00000518638 ETV7Q9Y603 341 aa4.43□□□□□ -1.7
CCDC6-203ENST00000518638 A0A087WYN8 130 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 TRBV9A0A0B4J1U6 114 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 TMEM213A2RRL7 107 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 TMEM212A6NML5 194 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 SC5DO75845 299 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 IFNA21P01568 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 IFNA17P01571 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 CT45A6P0DMU7 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 CT45A5P0DMU8 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 CT45A7P0DMV0 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 SERPINA2P20848 420 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 GALP22466 123 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 CRISP1P54107 249 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 ADARB1P78563 741 aaKnown RBP4.42□□□□□ -1.7
CCDC6-203ENST00000518638 GNMTQ14749 295 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 MEF2DQ14814 521 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 PTGES3Q15185 160 aaKnown RBP4.42□□□□□ -1.7
CCDC6-203ENST00000518638 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 LAMTOR1Q6IAA8 161 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 DHRS11Q6UWP2 260 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 GSG1LQ6UXU4 331 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 ZNF645Q8N7E2 425 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 OR10K1Q8NGX5 313 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 OR11H2Q8NH07 326 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 OR4A5Q8NH83 315 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 IL4I1Q96RQ9 567 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 URM1Q9BTM9 101 aaKnown RBP4.42□□□□□ -1.7
CCDC6-203ENST00000518638 NDUFAF3Q9BU61 184 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms