RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 IFNA5P01569 189 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 IGKV2D-40P01614 121 aaPredicted RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 FAM228BP0C875 321 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 TRGC1P0CF51 173 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 SULT1A3P0DMM9 295 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 SULT1A4P0DMN0 295 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 LYNX1P0DP58 116 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 DEFA4P12838 97 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 RPS12P25398 132 aaKnown RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 REG1BP48304 166 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 NKX2-5P52952 324 aaPredicted RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 MRPS15P82914 257 aaKnown RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 MOGQ16653 247 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 Q1T7F1 81 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 FAM27BQ5VT28 67 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 SYPL2Q5VXT5 272 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 UNQ6190/PRO20217Q6UXQ8 127 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 GID4Q8IVV7 300 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 C10orf67Q8IYJ2 551 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 PTH2Q96A98 100 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 FUT9Q9Y231 359 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 SOX21Q9Y651 276 aaPredicted RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 ZFYVE9O95405 1425 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 KIAA2026Q5HYC2 2103 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 IGKV3OR2-268A0A0C4DH90 116 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 SLC22A1O15245 554 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 TGOLN2O43493 480 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 IGHV3-7P01780 117 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 KRT7P08729 469 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 CTXN2P0C2S0 81 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 CDKN2CP42773 168 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 FXYD2P54710 66 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 ERVS71-1P61550 626 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 FADDQ13158 208 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 ZNF676Q8N7Q3 588 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 C10orf105Q8TEF2 133 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 CNBD2Q96M20 576 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 OR8D2Q9GZM6 311 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 PAQR5Q9NXK6 330 aaPredicted RBP1.3□□□□□ -2.2
SQLE-202ENST00000518604 SNAPC4Q5SXM2 1469 aa1.3□□□□□ -2.2
SQLE-202ENST00000518604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.29□□□□□ -2.2
SQLE-202ENST00000518604 IRGMA1A4Y4 181 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 LYPLA2O95372 231 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 IL9P15248 144 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 HLA-DMBP28068 263 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 LSM6P62312 80 aaKnown RBP1.29□□□□□ -2.2
SQLE-202ENST00000518604 RPL18Q07020 188 aaKnown RBP1.29□□□□□ -2.2
SQLE-202ENST00000518604 SFXN4Q6P4A7 337 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 PRAP1Q96NZ9 151 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 OR51I1Q9H343 314 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 PSTPIP2Q9H939 334 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 XPNPEP1Q9NQW7 623 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 LSM5Q9Y4Y9 91 aaKnown RBP1.29□□□□□ -2.2
SQLE-202ENST00000518604 EVC2Q86UK5 1308 aa1.29□□□□□ -2.2
SQLE-202ENST00000518604 TMEM210A6NLX4 147 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 EVPLLA8MZ36 301 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 TRAPPC2LH3BP13 241 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 OR5G3P0C626 314 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 METTL15P1P0C7V9 234 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 RANP62826 216 aaKnown RBP1.28□□□□□ -2.2
SQLE-202ENST00000518604 FAM173BQ6P4H8 233 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 DHFR2Q86XF0 187 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 OR8B3Q8NGG8 313 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 ERMAPQ96PL5 475 aaPredicted RBP1.28□□□□□ -2.2
SQLE-202ENST00000518604 PAIP2Q9BPZ3 127 aaKnown RBP1.28□□□□□ -2.2
SQLE-202ENST00000518604 MRPS26Q9BYN8 205 aaKnown RBP1.28□□□□□ -2.2
SQLE-202ENST00000518604 EFCAB1Q9HAE3 211 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 IL36BQ9NZH7 164 aa1.28□□□□□ -2.2
SQLE-202ENST00000518604 RTTNQ86VV8 2226 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 IBA57-AS1B1ANH7 110 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 SDCBPO00560 298 aaPredicted RBP1.27□□□□□ -2.21
SQLE-202ENST00000518604 TCRBP04435 133 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 CALB1P05937 261 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 RPS17P08708 135 aaKnown RBP1.27□□□□□ -2.21
SQLE-202ENST00000518604 CCL20P78556 96 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 HIST3H3Q16695 136 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 IBA57Q5T440 356 aaKnown RBP1.27□□□□□ -2.21
SQLE-202ENST00000518604 LPCAT4Q643R3 524 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 C1orf158Q8N1D5 194 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 TMEM86BQ8N661 226 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 C9orf163Q8N9P6 203 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 CDC26Q8NHZ8 85 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 ADAT1Q9BUB4 502 aaKnown RBP1.27□□□□□ -2.21
SQLE-202ENST00000518604 IL20Q9NYY1 176 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 GUCA1BQ9UMX6 200 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 TENM1Q9UKZ4 2725 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 KMT2BQ9UMN6 2715 aaPredicted RBP1.27□□□□□ -2.21
SQLE-202ENST00000518604 SDK1Q7Z5N4 2213 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 MALRD1Q5VYJ5 2156 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 NUMA1Q14980 2115 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 PTPRSQ13332 1948 aa1.27□□□□□ -2.21
SQLE-202ENST00000518604 CPAMD8Q8IZJ3 1885 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 PCF11O94913 1555 aaKnown RBP1.26□□□□□ -2.21
SQLE-202ENST00000518604 ADGRL3Q9HAR2 1447 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 GGT3PA6NGU5 568 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 GOLGA6L19H0YKK7 550 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 KCNK1O00180 336 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 PRM2P04554 102 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms