RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CD300LFQ8TDQ1 290 aa11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 BSCL2Q96G97 398 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 SLC5A7Q9GZV3 580 aa11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TMEM140Q9NV12 185 aa11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 NDUFB11Q9NX14 153 aa11.24□□□□□ -0.61
CSGALNACT1-204ENST00000517494 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TRDV1A0A1B0GX56 115 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 IFNA4P05014 189 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 NQO2P16083 231 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TAS2R31P59538 309 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 ZNF124Q15973 351 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 Q56UQ5 140 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 AADACL3Q5VUY0 350 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 GDPD1Q8N9F7 314 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 BEST4Q8NFU0 473 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 RARRES2Q99969 163 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 PCLOQ9Y6V0 5065 aa11.23□□□□□ -0.61
CSGALNACT1-204ENST00000517494 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 MPTX1A8MV57 137 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 NDUFA4O00483 81 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 SCGNO76038 276 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 HPRT1P00492 218 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 PPYP01298 95 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TRAPPC2P0DI81 140 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TRAPPC2BP0DI82 140 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 TMEM17Q86X19 198 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 GVQW1Q8N7I0 195 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 CHRDL1Q9BU40 450 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 MFFQ9GZY8 342 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
CSGALNACT1-204ENST00000517494 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 DEFB4AO15263 64 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 ERVK-16P61578 105 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 WT1-ASQ06250 92 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 ZBTB34Q8NCN2 500 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 RNF2Q99496 336 aa11.21□□□□□ -0.61
CSGALNACT1-204ENST00000517494 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 YIF1AO95070 293 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 SERPINE2P07093 398 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PRR20EP86478 221 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PRR20CP86479 221 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PRR20DP86480 221 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PRR20BP86481 221 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PRR20AP86496 221 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 MSMO1Q15800 293 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 ZNF773Q6PK81 442 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 GBGT1Q8N5D6 347 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 SCARB1Q8WTV0 552 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 NRG4Q8WWG1 115 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 RHBDL2Q9NX52 303 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 RRP15Q9Y3B9 282 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
CSGALNACT1-204ENST00000517494 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 ADMP35318 185 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 MFAP2P55001 183 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 POU2AF1Q16633 256 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 THOC7Q6I9Y2 204 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 HSD17B13Q7Z5P4 300 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 CNBD2Q96M20 576 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 PLEKHA2Q9HB19 425 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-204ENST00000517494 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 VPS13DQ5THJ4 4388 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 C15orf62A8K5M9 175 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 K7EMT4 169 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 HERV-K104P61576 105 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 TMEM116Q8NCL8 245 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 CMTM3Q96MX0 182 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 COMMD9Q9P000 198 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
CSGALNACT1-204ENST00000517494 IGHV7-4-1A0A0J9YVY3 117 aa11.17□□□□□ -0.62
CSGALNACT1-204ENST00000517494 MEIS3P1A6NDR6 274 aa11.17□□□□□ -0.62
CSGALNACT1-204ENST00000517494 MARCH11A6NNE9 402 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms