RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PLEKHG7Q6ZR37 379 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 TEN1Q86WV5 123 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 GPHB5Q86YW7 130 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 C1orf174Q8IYL3 243 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 C10orf111Q8N326 155 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 GPX8Q8TED1 209 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 APOL4Q9BPW4 351 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 HPF1Q9NWY4 346 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 CKLFQ9UBR5 152 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 MYO3BQ8WXR4 1341 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 DOCK11Q5JSL3 2073 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 NCF1CA8MVU1 366 aaPredicted RBP-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 NCF1P14598 390 aaPredicted RBP-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 COX7CP15954 63 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 TNNI1P19237 187 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 CD86P42081 329 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 SULT1A2P50226 295 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 FKBP1AP62942 108 aaKnown RBP-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 HBG1P69891 147 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 HBG2P69892 147 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 EIF3IQ13347 325 aaKnown RBP-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 EDDM3AQ14507 147 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 ATAD3BQ5T9A4 648 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 ARMC12Q5T9G4 340 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 ZNF833PQ6ZTB9 187 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 OR4C5Q8NGB2 326 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 CLHC1Q8NHS4 586 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 GAL3ST2Q9H3Q3 398 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 XAGE1AQ9HD64 81 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 TAF1LQ8IZX4 1826 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 CHD7Q9P2D1 2997 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 SIPA1L2Q9P2F8 1722 aaPredicted RBP-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 ERBINQ96RT1 1412 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 ATP8B3O60423 1300 aa-3.7□□□□□ -3
RNU6-539P-201ENST00000516665 PLXNA1Q9UIW2 1896 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 MYH7BA7E2Y1 1941 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 TCRBV4S1A1TA0A5B7 111 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 XRCC2O43543 280 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 MPC1LP0DKB6 136 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 ARF4P18085 180 aaPredicted RBP-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 HLA-DPA1P20036 260 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 RCVRNP35243 200 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 DEFB135Q30KP9 77 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 TWF2Q6IBS0 349 aaKnown RBP-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 CPNE2Q96FN4 548 aaPredicted RBP-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 SLC25A21Q9BQT8 299 aaPredicted RBP-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 OPTCQ9UBM4 332 aa-3.71□□□□□ -3
RNU6-539P-201ENST00000516665 A0A1B0GX12 115 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 TPD52L2O43399 206 aaKnown RBP-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 EVI2AP22794 236 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 GADD45AP24522 165 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 RPL30P62888 115 aaKnown RBP-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 SLC35B1P78383 322 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 PRDX1Q06830 199 aaKnown RBP-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 TMEM107Q6UX40 140 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 SSBP3-AS1Q7Z2R9 100 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 SPC24Q8NBT2 197 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 OR7G2Q8NG99 324 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 OR4E2Q8NGC2 313 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 OR52E5Q8NH55 327 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 MALSU1Q96EH3 234 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 DIABLOQ9NR28 239 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 LINC00527Q9UJ94 153 aa-3.72□□□□□ -3
RNU6-539P-201ENST00000516665 TNS3Q68CZ2 1445 aa-3.72□□□□□ -3.01
RNU6-539P-201ENST00000516665 ITPR2Q14571 2701 aa-3.72□□□□□ -3.01
RNU6-539P-201ENST00000516665 NUP153P49790 1475 aaKnown RBP-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 TRAV8-2A0A0B4J237 113 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 PCP4L1A6NKN8 68 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 ZNF815PA8K554 130 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 I3L4J1 428 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 PRPSAP2O60256 369 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 GMDSO60547 372 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 YEATS4O95619 227 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 IFNW1P05000 195 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 HSPA9P38646 679 aaKnown RBP-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 HAAOP46952 286 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 SNCBQ16143 134 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 RNASEKQ6P5S7 137 aaKnown RBP-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 CASC1Q6TDU7 716 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 TMEM251Q8N6I4 163 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 DTD1Q8TEA8 209 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 CRACR2AQ9BSW2 395 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 GNB1LQ9BYB4 327 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 NAA50Q9GZZ1 169 aaKnown RBP-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 METTL9Q9H1A3 318 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 PAQR5Q9NXK6 330 aaPredicted RBP-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 CFL2Q9Y281 166 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 C10orf71Q711Q0 1435 aa-3.73□□□□□ -3.01
RNU6-539P-201ENST00000516665 SBF1O95248 1867 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 SRIP30626 198 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 CENPWQ5EE01 88 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 C1orf194Q5T5A4 169 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 CCDC91Q7Z6B0 441 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 C8orf31Q8N9H6 132 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 ANP32EQ9BTT0 268 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 ADA2Q9NZK5 511 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 CLEC4AQ9UMR7 237 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 PIN4Q9Y237 131 aaKnown RBP-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 SAR1BQ9Y6B6 198 aa-3.74□□□□□ -3.01
RNU6-539P-201ENST00000516665 RFX7Q2KHR2 1363 aa-3.75□□□□□ -3.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms