RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 LYSMD2Q8IV50 215 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 GPX8Q8TED1 209 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 AP3S1Q92572 193 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 ISOC1Q96CN7 298 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 PLEKHA3Q9HB20 300 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 OR51B2Q9Y5P1 312 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 TEX50A0A1B0GTY4 177 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 MFSD2BA6NFX1 497 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 PTBP1P26599 531 aaKnown RBP eCLIP10.33□□□□□ -0.76
TCOF1-215ENST00000515516 GPR183P32249 361 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 G6PCP35575 357 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 PHLDA2Q53GA4 152 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF57Q68EA5 555 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-215ENST00000515516 SLC16A13Q7RTY0 426 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 GDPD1Q8N9F7 314 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 FCAMRQ8WWV6 532 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 LSM10Q969L4 123 aaKnown RBP10.33□□□□□ -0.76
TCOF1-215ENST00000515516 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 TSC22D3Q99576 134 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 FXYD6Q9H0Q3 95 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 ZC4H2Q9NQZ6 224 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 PRNDQ9UKY0 176 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 UFC1Q9Y3C8 167 aa10.33□□□□□ -0.76
TCOF1-215ENST00000515516 HPGDSO60760 199 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 SERPINE2P07093 398 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 ELK1P19419 428 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 ANKRD55Q3KP44 614 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 SLC38A6Q8IZM9 456 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 CADM3Q8N126 398 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 UXS1Q8NBZ7 420 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF502Q8TBZ5 544 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 WDR89Q96FK6 387 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-215ENST00000515516 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 CEPT1Q9Y6K0 416 aa10.32□□□□□ -0.76
TCOF1-215ENST00000515516 A8MWP6 167 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 CD7P09564 240 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF585BQ52M93 769 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 RBPMS2Q6ZRY4 209 aaKnown RBP10.31□□□□□ -0.76
TCOF1-215ENST00000515516 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 OR4A16Q8NH70 328 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 CACNG8Q8WXS5 425 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 NDUFA4L2Q9NRX3 87 aa10.31□□□□□ -0.76
TCOF1-215ENST00000515516 FAM212BQ9NTI7 297 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-215ENST00000515516 HUWE1Q7Z6Z7 4374 aaKnown RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 PGAM2P15259 253 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF182P17025 639 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 EDN2P20800 178 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 ELLP55199 621 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 UCP3P55916 312 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 WT1-ASQ06250 92 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 H2BFWTQ7Z2G1 175 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 C15orf40Q8WUR7 153 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 BSCL2Q96G97 398 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 SRD5A3Q9H8P0 318 aa10.3□□□□□ -0.76
TCOF1-215ENST00000515516 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
TCOF1-215ENST00000515516 TNCP24821 2201 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 IGHV3-35A0A0C4DH35 117 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 OR2T8A6NH00 312 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 TGOLN2O43493 480 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
TCOF1-215ENST00000515516 RNASE12Q5GAN4 147 aaKnown RBP10.29□□□□□ -0.76
TCOF1-215ENST00000515516 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 SPSB3Q6PJ21 355 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 UNQ9165/PRO28630Q6UXU0 137 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 TMEM61Q8N0U2 210 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 UBAC2Q8NBM4 344 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 C21orf62Q9NYP8 219 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 MLXQ9UH92 298 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
TCOF1-215ENST00000515516 KMT2CQ8NEZ4 4911 aaKnown RBP10.28□□□□□ -0.76
TCOF1-215ENST00000515516 IGHV3-21A0A0B4J1V1 117 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 C15orf61A6NNL5 157 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 M0QYG6 137 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 Q56UQ5 140 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 RNASE10Q5GAN6 216 aaKnown RBP10.28□□□□□ -0.76
TCOF1-215ENST00000515516 GPR107Q5VW38 600 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 ATP6V0BQ99437 205 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-215ENST00000515516 EDA2RQ9HAV5 297 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 GAR1Q9NY12 217 aaKnown RBP10.28□□□□□ -0.76
TCOF1-215ENST00000515516 EXTL2Q9UBQ6 330 aa10.28□□□□□ -0.76
TCOF1-215ENST00000515516 RBMY1BA6NDE4 496 aaKnown RBP10.27□□□□□ -0.77
TCOF1-215ENST00000515516 RBMY1EA6NEQ0 496 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms