RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RBM7Q9Y580 266 aaKnown RBP6.63□□□□□ -1.35
CCL28-204ENST00000514421 WSB1Q9Y6I7 421 aa6.63□□□□□ -1.35
CCL28-204ENST00000514421 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 LINC00473A8K010 186 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 TMEM50AO95807 157 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 MOSP00540 346 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 SEC11BP0C7V7 166 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 DUTP33316 252 aaKnown RBP6.62□□□□□ -1.35
CCL28-204ENST00000514421 PROK1P58294 105 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 RPL7L1Q6DKI1 246 aaKnown RBP6.62□□□□□ -1.35
CCL28-204ENST00000514421 FAM71F2Q6NXP2 309 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 ZNF833PQ6ZTB9 187 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 COMMD7Q86VX2 200 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 LYPD6BQ8NI32 183 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 SMIM8Q96KF7 97 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 NABP2Q9BQ15 211 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 ZNF251Q9BRH9 671 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 GINS3Q9BRX5 216 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 SLC25A31Q9H0C2 315 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 HIPK2Q9H2X6 1198 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 HSPB7Q9UBY9 170 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 SIGLEC9Q9Y336 463 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 TENM1Q9UKZ4 2725 aa6.62□□□□□ -1.35
CCL28-204ENST00000514421 SAA2-SAA4A0A096LPE2 208 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 NCBP2LA6PVI3 153 aaKnown RBP6.61□□□□□ -1.35
CCL28-204ENST00000514421 RAMP3O60896 148 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 LY86O95711 162 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 AMY1AP04745 511 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 SAA2P0DJI9 122 aaPredicted RBP6.61□□□□□ -1.35
CCL28-204ENST00000514421 CT45A6P0DMU7 189 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 CT45A5P0DMU8 189 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 CT45A7P0DMV0 189 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 SPP1P10451 314 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 MC5RP33032 325 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 KIR2DS2P43631 304 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 LPAR6P43657 344 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 GPR12P47775 334 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 SULT1A2P50226 295 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 POLR2GP62487 172 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCL28-204ENST00000514421 EWSR1Q01844 656 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCL28-204ENST00000514421 RPL39P5Q59GN2 51 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 Q6ZS46 218 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 FOXRED2Q8IWF2 684 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 CXorf58Q96LI9 332 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 ZNF702PQ9H963 129 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 SERTAD4Q9NUC0 356 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 CACNG5Q9UF02 275 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 CACFD1Q9UGQ2 172 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 MOB4Q9Y3A3 225 aa6.61□□□□□ -1.35
CCL28-204ENST00000514421 BORCS7-ASMTA0A0B4J1R7 106 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 IGSF23A1L1A6 192 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 RAB19A4D1S5 217 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 SHOXO15266 292 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 SYNGR2O43760 224 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 HPRT1P00492 218 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 NHLH2Q02577 135 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 TNFRSF9Q07011 255 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 POU2AF1Q16633 256 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 FBLN7Q53RD9 439 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 ARSJQ5FYB0 599 aaPredicted RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 C9orf152Q5JTZ5 239 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 FAM74A1Q5RGS3 127 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 UQCC3Q6UW78 93 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 SPAG16Q8N0X2 631 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 Q8N6K4 173 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 OR5AN1Q8NGI8 311 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 SGMS2Q8NHU3 365 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 BSCL2Q96G97 398 aaPredicted RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 ADTRPQ96IZ2 230 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 CITED4Q96RK1 184 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 TSNAXQ99598 290 aaKnown RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 RNF5Q99942 180 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 CITED1Q99966 193 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 MRPL20Q9BYC9 149 aaKnown RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 PARD6GQ9BYG4 376 aaPredicted RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 WFDC1Q9HC57 220 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.6□□□□□ -1.35
CCL28-204ENST00000514421 PFDN2Q9UHV9 154 aa6.6□□□□□ -1.35
CCL28-204ENST00000514421 ANK2Q01484 3957 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 WNK1Q9H4A3 2382 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 KRBOX1C9JBD0 128 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 M0R1X1 148 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 SSSCA1O60232 199 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 MED6O75586 246 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 SCAF4O95104 1147 aaKnown RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 S1PR2O95136 353 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 IL6RP08887 468 aaPredicted RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 VDAC2P45880 294 aaPredicted RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 THBS3P49746 956 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 SULT1A1P50225 295 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 RAB5CP51148 216 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 AKR1C2P52895 323 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 F2RL1P55085 397 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms