RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 NTN1O95631 604 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 GPX3P22352 226 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 TAS2R46P59540 309 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 ALG10Q5BKT4 473 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 OTOSQ8NHW6 89 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 HES7Q9BYE0 225 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 LSM4Q9Y4Z0 139 aaKnown RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 VWA8A3KMH1 1905 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 TRAV4A0A0B4J268 109 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 LY6LH3BQJ8 138 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PPP1R3DO95685 299 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 P01737 135 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 IGHA1P01876 353 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 LOXP28300 417 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-208ENST00000514335 RND3P61587 244 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PMVKQ15126 192 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PHLDA2Q53GA4 152 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 MOB3BQ86TA1 216 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 APCDD1LQ8NCL9 501 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 FOXC2Q99958 501 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 CXCL16Q9H2A7 254 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 FIS1Q9Y3D6 152 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 UNC80Q8N2C7 3258 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 EXPH5Q8NEV8 1989 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 ANK1P16157 1881 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 A0A1B0GV50 99 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF737O75373 536 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 IGFBP3P17936 291 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-208ENST00000514335 CLEC12BQ2HXU8 276 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 MFSD12Q6NUT3 480 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PRSS41Q7RTY9 318 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 SIGLECL1Q8N7X8 197 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 OR4X2Q8NGF9 303 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 C2orf15Q8WU43 125 aaKnown RBP5.91□□□□□ -1.46
NIPBL-208ENST00000514335 SLC25A44Q96H78 314 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PBOV1Q9GZY1 135 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 SMDT1Q9H4I9 107 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PLAC1Q9HBJ0 212 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 DYSFO75923 2080 aa5.91□□□□□ -1.46
NIPBL-208ENST00000514335 PLXNA4Q9HCM2 1894 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 MIA3Q5JRA6 1907 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 EDIL3O43854 480 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 CD3DP04234 171 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 SRP19P09132 144 aaKnown RBP5.9□□□□□ -1.46
NIPBL-208ENST00000514335 LGALS1P09382 135 aaKnown RBP5.9□□□□□ -1.46
NIPBL-208ENST00000514335 TACSTD2P09758 323 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 ATP4BP51164 291 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 VAX1Q5SQQ9 334 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 RPL7L1Q6DKI1 246 aaKnown RBP5.9□□□□□ -1.46
NIPBL-208ENST00000514335 SLC35E4Q6ICL7 350 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 WFDC11Q8NEX6 87 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 GABARAPL3Q9BY60 117 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 PRSS22Q9GZN4 317 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 RPRMQ9NS64 109 aa5.9□□□□□ -1.46
NIPBL-208ENST00000514335 MYLKQ15746 1914 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 SPTBN5Q9NRC6 3674 aaKnown RBP5.9□□□□□ -1.47
NIPBL-208ENST00000514335 TRAV5A0A0B4J249 113 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 K7EMT4 169 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 SLC17A2O00624 439 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 RBP4P02753 201 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 IL3P08700 152 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 LINC00032P0C843 101 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 CECR9P0C854 216 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 C3orf79P0CE67 100 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 CA7P43166 264 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 INSL4Q14641 139 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 IL17AQ16552 155 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 SLC25A48Q6ZT89 311 aaKnown RBP5.9□□□□□ -1.47
NIPBL-208ENST00000514335 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF564Q8TBZ8 553 aaPredicted RBP5.9□□□□□ -1.47
NIPBL-208ENST00000514335 ZPLD1Q8TCW7 415 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 SIT1Q9Y3P8 196 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 F11RQ9Y624 299 aaKnown RBP5.9□□□□□ -1.47
NIPBL-208ENST00000514335 HTTP42858 3142 aa5.9□□□□□ -1.47
NIPBL-208ENST00000514335 NUP210Q8TEM1 1887 aaPredicted RBP5.9□□□□□ -1.47
NIPBL-208ENST00000514335 TRAV1-1A0A0B4J248 108 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 FAM90A26D6RGX4 464 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 STC2O76061 302 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 CLDN14O95500 239 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 PMCHL1Q16048 86 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 Q6Q795 121 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 TMEM150AQ86TG1 271 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 CHCHD5Q9BSY4 110 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 COMMD5Q9GZQ3 224 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 CHST6Q9GZX3 395 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 CSAG2Q9Y5P2 127 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 MCM3APO60318 1980 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 DHRS3O75911 302 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 TRIM40Q6P9F5 258 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 Q6ZQT7 251 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 SEM1Q6ZVN7 128 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 SGPP2Q8IWX5 399 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 OR10J6PQ8NGY7 276 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 APOBEC4Q8WW27 367 aaKnown RBP5.89□□□□□ -1.47
NIPBL-208ENST00000514335 NUS1Q96E22 293 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 TBL1YQ9BQ87 522 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms