RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FER1L5A0AVI2 2057 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF318Q5VUA4 2279 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 IGLV3-12A0A075B6K2 115 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 A8MWP6 167 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 J3KRW8 73 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 DLEU1O43261 78 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ACSF3Q4G176 576 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 Q6ZRM9 215 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 LINC01551Q86U37 167 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 INSIG2Q9Y5U4 225 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 IGLV3-32A0A0A0MS00 114 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 M0R296 226 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 MOSP00540 346 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PLP1P60201 277 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 SRSF12Q8WXF0 261 aaKnown RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 RNF166Q96A37 237 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 C21orf140B9A014 251 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 SLC25A17O43808 307 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 CSRP1P21291 193 aaKnown RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PRRX1P54821 245 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 FAM201AQ5SY85 155 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PEAR1Q5VY43 1037 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 BEND2Q8NDZ0 799 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 IMMP1LQ96LU5 166 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 TRIOBPQ9H2D6 2365 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 UMODP07911 640 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 GCSHP23434 173 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 ACTL10Q5JWF8 245 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PMS2CLQ68D20 193 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 ACP7Q6ZNF0 438 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 C1orf210Q8IVY1 113 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 EAF1Q96JC9 268 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 DOCK7Q96N67 2140 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 LINC00470Q9BZP3 86 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PRDM13Q9H4Q3 707 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF716A6NP11 495 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 TNFSF13O75888 250 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 SEMA5BQ9P283 1151 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PLXNA4Q9HCM2 1894 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM50AO95807 157 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 PSG7Q13046 419 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 GCSAMQ8N6F7 178 aa6.51□□□□□ -1.37
CLCN3-209ENST00000513761 SNRNP40Q96DI7 357 aaKnown RBP6.51□□□□□ -1.37
CLCN3-209ENST00000513761 TIMP3P35625 211 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 SELENOTP62341 195 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 HBBP68871 147 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF146Q15072 292 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 TWIST1Q15672 202 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ATP1A1-AS1Q5TC04 95 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF497Q6ZNH5 498 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 HSPB7Q9UBY9 170 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 CIDEAO60543 219 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ARF6P62330 175 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
CLCN3-209ENST00000513761 PET117Q6UWS5 81 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF324O75467 553 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-209ENST00000513761 IGLV3-19P01714 112 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 GNB2P62879 340 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 TBR1Q16650 682 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 HS3ST6Q96QI5 342 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-209ENST00000513761 APC2O95996 2303 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 RPL27AP46776 148 aaKnown RBP6.5□□□□□ -1.37
CLCN3-209ENST00000513761 CLDN18P56856 261 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 SCGB1D4Q6XE38 83 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 LINC00305Q7Z4B0 112 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 FABP2P12104 132 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 LINC00205P59089 165 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 GOLT1AQ6ZVE7 132 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF714Q96N38 554 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 SFXN3Q9BWM7 321 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 POLEQ07864 2286 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 PLXNA2O75051 1894 aa6.5□□□□□ -1.37
CLCN3-209ENST00000513761 TRGV8A0A0C4DH27 118 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 CKS2P33552 79 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 RPL30P62888 115 aaKnown RBP6.49□□□□□ -1.37
CLCN3-209ENST00000513761 GRAMD2BQ96HH9 432 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 GUCD1Q96NT3 240 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM208Q9BTX3 173 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 IDI2-AS1Q9NZ38 188 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 CDC42EP3Q9UKI2 254 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 WDR83OSQ9Y284 106 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 HOXA4Q00056 320 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-209ENST00000513761 SPATA31B1PQ5VZV4 182 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 GFRALQ6UXV0 394 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 DOCK8Q8NF50 2099 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM189A5PLL7 270 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 CD40P25942 277 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 EFNB3Q15768 340 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 C20orf204Q6ZNR8 217 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 NIT1Q86X76 327 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 ELOVL5Q9NYP7 299 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms