RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
COL11A1-210ENST00000512756 IGHV2OR16-5A0A0B4J2B6 119 aa10.52□□□□□ -0.73
COL11A1-210ENST00000512756 Q6AWC8 147 aa10.52□□□□□ -0.73
COL11A1-210ENST00000512756 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
COL11A1-210ENST00000512756 TRBV20OR9-2A0A075B6H5 130 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 RSPO4Q2I0M5 234 aaPredicted RBP10.51□□□□□ -0.73
COL11A1-210ENST00000512756 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 WBP1Q96G27 269 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 PPP1R17O96001 155 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 FLVCR1-AS1Q8TAF5 88 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 WFIKKN1Q96NZ8 548 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 PRR19A6NJB7 356 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 C7orf71A4D174 169 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 HOXA5P20719 270 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
COL11A1-210ENST00000512756 ZNF414Q96IQ9 312 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 LINC00312Q9Y6C7 94 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 PRSS2P07478 247 aa10.51□□□□□ -0.73
COL11A1-210ENST00000512756 ZNF837Q96EG3 531 aaPredicted RBP10.51□□□□□ -0.73
COL11A1-210ENST00000512756 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 A1L4Q6 167 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 LEMD1Q68G75 181 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 FAM159AQ6UWV7 190 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 TMEM144Q7Z5S9 345 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 OR52E5Q8NH55 327 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 FOXI3A8MTJ6 420 aaPredicted RBP10.5□□□□□ -0.73
COL11A1-210ENST00000512756 OR11H12B2RN74 326 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 PRSS8Q16651 343 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 TEX45Q8NA69 505 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 OR11H1Q8NG94 326 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 OR11H2Q8NH07 326 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 AKIRIN1Q9H9L7 192 aaPredicted RBP10.5□□□□□ -0.73
COL11A1-210ENST00000512756 H7C2G1 150 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 RALGAPA2Q2PPJ7 1873 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 IGKV1-9A0A0C4DH69 117 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 FGF16O43320 207 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 YPEL1O60688 119 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 IGHV1-2P23083 117 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 ATOH7Q8N100 152 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 YPEL2Q96QA6 119 aa10.5□□□□□ -0.73
COL11A1-210ENST00000512756 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
COL11A1-210ENST00000512756 SLC17A3O00476 420 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 ATP5G3P48201 142 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 C21orf62-AS1Q17RA5 79 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 FAM216BQ8N7L0 139 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 PRELID3AQ96N28 172 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 PATJQ8NI35 1801 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 PLXNA1Q9UIW2 1896 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 CIARTQ8N365 385 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 TBL2Q9Y4P3 447 aaKnown RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 A0A0G2JMM0 328 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 A0A1W2PPB8 328 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 A0A1W2PRS3 328 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 KIR3DP1A8MWS1 328 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 UMODP07911 640 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 FAM27E3Q08E93 113 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 ATRAIDQ6UW56 229 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 NEU4Q8WWR8 484 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-210ENST00000512756 FBXL15Q9H469 300 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 ATP5LO75964 103 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 ATP5J2P56134 94 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 KLRB1Q12918 225 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 CSRP2Q16527 193 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 PLPPR1Q8TBJ4 325 aa10.49□□□□□ -0.73
COL11A1-210ENST00000512756 GAS1P54826 345 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
COL11A1-210ENST00000512756 CTAG1AP78358 180 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 ID3Q02535 119 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 LHX2P50458 406 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 SCN2AQ99250 2005 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 IGKV3D-15A0A087WSY6 115 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 PRR32B1ATL7 298 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 C9orf172C9J069 976 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 IGKV3-15P01624 115 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 ZNF56Q15929 161 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 PAQR4Q8N4S7 273 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-210ENST00000512756 LYZL4Q96KX0 146 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 KLK15Q9H2R5 256 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 F11RQ9Y624 299 aaKnown RBP10.48□□□□□ -0.73
COL11A1-210ENST00000512756 FAM57AQ8TBR7 257 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 SIPA1L1O43166 1804 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 LY6EQ16553 131 aa10.48□□□□□ -0.73
COL11A1-210ENST00000512756 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
COL11A1-210ENST00000512756 MRPS16Q9Y3D3 137 aaKnown RBP10.48□□□□□ -0.73
COL11A1-210ENST00000512756 MTCL1Q9Y4B5 1905 aaKnown RBP10.47□□□□□ -0.73
COL11A1-210ENST00000512756 IGKV1D-13A0A0B4J2D9 117 aa10.47□□□□□ -0.73
COL11A1-210ENST00000512756 LOC105371267A0A1B0GV96 52 aa10.47□□□□□ -0.73
COL11A1-210ENST00000512756 H0YIZ8 118 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms