RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 HUWE1Q7Z6Z7 4374 aaKnown RBP12.54□□□□□ -0.4
DDX41-213ENST00000512027 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 TPPPO94811 219 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 RAB3DO95716 219 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 DHFRP00374 187 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 S100GP29377 79 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 ARL3P36405 182 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 TAS2R19P59542 299 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 STEAP1BQ6NZ63 245 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 ADAMTSL5Q6ZMM2 481 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 OR1L8Q8NGR8 309 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
DDX41-213ENST00000512027 IGHV3-21A0A0B4J1V1 117 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 SNAPC5O75971 98 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
DDX41-213ENST00000512027 TBPP20226 339 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 MFAP2P55001 183 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 PIGPP57054 158 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 KLK9Q2XQG4 91 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 GDPD1Q8N9F7 314 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 OR13C8Q8NGS7 320 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 KLK9Q9UKQ9 250 aa12.53□□□□□ -0.4
DDX41-213ENST00000512027 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.41
DDX41-213ENST00000512027 SERPINE2P07093 398 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 FGF2P09038 288 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 RND3P61587 244 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 OR4C16Q8NGL9 310 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 LSM10Q969L4 123 aaKnown RBP12.52□□□□□ -0.41
DDX41-213ENST00000512027 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
DDX41-213ENST00000512027 STAB2Q8WWQ8 2551 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 IGHV3-35A0A0C4DH35 117 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 CCDC160A6NGH7 325 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 H0Y980 276 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 GPR183P32249 361 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 MECP2P51608 486 aaKnown RBP12.51□□□□□ -0.41
DDX41-213ENST00000512027 MRPS10P82664 201 aaKnown RBP12.51□□□□□ -0.41
DDX41-213ENST00000512027 SP6Q3SY56 376 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 SPINK9Q5DT21 86 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 Q8N1Y9 231 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 TERB2Q8NHR7 220 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 MCFD2Q8NI22 146 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 ZNF502Q8TBZ5 544 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 ZNF486Q96H40 463 aaPredicted RBP12.51□□□□□ -0.41
DDX41-213ENST00000512027 SRSF8Q9BRL6 282 aaKnown RBP12.51□□□□□ -0.41
DDX41-213ENST00000512027 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
DDX41-213ENST00000512027 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
DDX41-213ENST00000512027 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 CLEC3BP05452 202 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 FRMD6-AS1P0C7T7 363 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 PTBP1P26599 531 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX41-213ENST00000512027 TNFSF8P32971 234 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
DDX41-213ENST00000512027 SLC25A24Q6NUK1 477 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 TSC22D3Q99576 134 aa12.5□□□□□ -0.41
DDX41-213ENST00000512027 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
DDX41-213ENST00000512027 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 C2orf70A6NJV1 201 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 CTDSPLO15194 276 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
DDX41-213ENST00000512027 CADM3Q8N126 398 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 CXorf58Q96LI9 332 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 NXF2Q9GZY0 626 aaKnown RBP12.49□□□□□ -0.41
DDX41-213ENST00000512027 SIGLEC8Q9NYZ4 499 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 COPZ2Q9P299 210 aa12.49□□□□□ -0.41
DDX41-213ENST00000512027 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 ZNF320A2RRD8 509 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
DDX41-213ENST00000512027 AKAIN1P0CW23 69 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 FOLR2P14207 255 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 AKR1C2P52895 323 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 MEF2DQ14814 521 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 CD300EQ496F6 205 aaPredicted RBP12.48□□□□□ -0.41
DDX41-213ENST00000512027 FAM209BQ5JX69 171 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 UNQ9165/PRO28630Q6UXU0 137 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
DDX41-213ENST00000512027 ZFAND1Q8TCF1 268 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 DYNLRB2Q8TF09 96 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 SOSTQ9BQB4 213 aa12.48□□□□□ -0.41
DDX41-213ENST00000512027 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms