RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CSTL1Q9H114 145 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 MGAT4AQ9UM21 535 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 TRBV6-6A0A0A6YYG2 114 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 TSPAN4O14817 238 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ACTL6BO94805 426 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 RRASP10301 218 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 PRSS3P35030 304 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ADMP35318 185 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ELLP55199 621 aaPredicted RBP8.49□□□□□ -1.05
RNF4-216ENST00000511859 UBE2KP61086 200 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ARL6IP1Q15041 203 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 RTL8BQ17RB0 113 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 VMA21Q3ZAQ7 101 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ZNF585BQ52M93 769 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 CLEC19AQ6UXS0 136 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ABHD1Q96SE0 405 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 Q9N2K0 584 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 OR1A1Q9P1Q5 309 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 ZNF257Q9Y2Q1 563 aa8.49□□□□□ -1.05
RNF4-216ENST00000511859 FABP12A6NFH5 140 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 MPTX1A8MV57 137 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 CREBL2O60519 120 aaPredicted RBP8.48□□□□□ -1.05
RNF4-216ENST00000511859 GSTT2P0CG29 244 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 GSTT2BP0CG30 244 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 MYOD1P15172 320 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 HLA-DRB3P79483 266 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 OR11H2Q8NH07 326 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 HRH4Q9H3N8 390 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 IFT46Q9NQC8 304 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 TRDCB7Z8K6 153 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 BET1O15155 118 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 IGSF11Q5DX21 431 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 OR52I2Q8NH67 350 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 EEF1AKMT3Q96AZ1 226 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 CCDC140Q96MF4 163 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 PTTG2Q9NZH5 202 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 UFC1Q9Y3C8 167 aa8.48□□□□□ -1.05
RNF4-216ENST00000511859 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 FABP7O15540 132 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 IGHV3-23P01764 117 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 CLEC3BP05452 202 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 DTYMKP23919 212 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 PSMB6P28072 239 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
RNF4-216ENST00000511859 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 SPANXN2Q5MJ10 180 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 PVRIGQ6DKI7 326 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 IDO2Q6ZQW0 420 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 BEST4Q8NFU0 473 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 OR4A5Q8NH83 315 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 GPX8Q8TED1 209 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
RNF4-216ENST00000511859 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 RDH8Q9NYR8 311 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 KLK11Q9UBX7 282 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 V9GYH0 126 aa8.47□□□□□ -1.05
RNF4-216ENST00000511859 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 TRBV7-1A0A0A6YYK4 115 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 OR4C46A6NHA9 309 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 NPIPB5A8MRT5 1133 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 J3QRK9 145 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 DHFRP00374 187 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 P0DMU3 169 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 ARPC4P59998 168 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 ZNF79Q15937 498 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 KLK9Q2XQG4 91 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 UNQ9165/PRO28630Q6UXU0 137 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 HOGA1Q86XE5 327 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 ZNF575Q86XF7 245 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 OR5B3Q8NH48 314 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 OSR1Q8TAX0 266 aaPredicted RBP8.46□□□□□ -1.06
RNF4-216ENST00000511859 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 FCAMRQ8WWV6 532 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 KLK9Q9UKQ9 250 aa8.46□□□□□ -1.06
RNF4-216ENST00000511859 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 M0R2N4 97 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 PMP2P02689 132 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 HIST1H1BP16401 226 aaKnown RBP8.45□□□□□ -1.06
RNF4-216ENST00000511859 HLA-DMAP28067 261 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 CBX5P45973 191 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 CDK10Q15131 360 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 DMRTA1Q5VZB9 504 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 CENPSQ8N2Z9 138 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 OR4A4PQ8NGN8 299 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 ADTRPQ96IZ2 230 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 CXorf58Q96LI9 332 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms