RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
USP53-207ENST00000510852 GTF3C1Q12789 2109 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 BATFQ16520 125 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 PRR31Q5SQ13 230 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 TSPO2Q5TGU0 170 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 SVBPQ8N300 66 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 FER1L6-AS1Q8NA97 138 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 RTBDNQ9BSG5 229 aaPredicted RBP7.89□□□□□ -1.15
USP53-207ENST00000510852 SPANXCQ9NY87 97 aa7.89□□□□□ -1.15
USP53-207ENST00000510852 RP1L1Q8IWN7 2480 aaPredicted RBP7.88□□□□□ -1.15
USP53-207ENST00000510852 MAS1P04201 325 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 SPNP16150 400 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 IL2RGP31785 369 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 RPL29P47914 159 aaKnown RBP7.88□□□□□ -1.15
USP53-207ENST00000510852 TFPI2P48307 235 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 C15orf54Q8N8G6 183 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 CNEP1R1Q8N9A8 125 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 OR2G3Q8NGZ4 309 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
USP53-207ENST00000510852 VSIG8P0DPA2 414 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 CD99P14209 185 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 HSD52Q0P140 79 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 ZNF788Q6ZQV5 615 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 NEGR1Q7Z3B1 354 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 GAPTQ8N292 157 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 C8orf46Q8TAG6 207 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 EEF1AKMT3Q96AZ1 226 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 SLC25A33Q9BSK2 321 aa7.88□□□□□ -1.15
USP53-207ENST00000510852 IRGMA1A4Y4 181 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 GAGE12BA1L429 117 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 MEGF11A6BM72 1044 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 COLCA2A8K830 154 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 EEF1E1-BLOC1S5C9J1V9 151 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 J3QRE1 110 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 M0R1B8 84 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 GABRPO00591 440 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 EEF1E1O43324 174 aaKnown RBP7.87□□□□□ -1.15
USP53-207ENST00000510852 HOXA3O43365 443 aaPredicted RBP7.87□□□□□ -1.15
USP53-207ENST00000510852 UPK1BO75841 260 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 TNFSF13O75888 250 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 SNAPC5O75971 98 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 AKR1C2P52895 323 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 ZNF684Q5T5D7 378 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 SLC18B1Q6NT16 456 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 ZNF773Q6PK81 442 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 PRSS48Q7RTY5 328 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 OR10AD1Q8NGE0 317 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 MRPL24Q96A35 216 aaKnown RBP7.87□□□□□ -1.15
USP53-207ENST00000510852 HEXA-AS1Q9H8Q6 139 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 SEC61A2Q9H9S3 476 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 A0A087WXM4 84 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 TRGV8A0A0C4DH27 118 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 DUXBA0A1W2PPF3 345 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 CDRT1O95170 752 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 G6PCP35575 357 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 PPP1CBP62140 327 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 BTG1P62324 171 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 PEA15Q15121 130 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 SPATA3Q8NHX4 192 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
USP53-207ENST00000510852 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
USP53-207ENST00000510852 DCTN5Q9BTE1 182 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 NRN1Q9NPD7 142 aa7.87□□□□□ -1.15
USP53-207ENST00000510852 ZGRF1Q86YA3 2104 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 MED12LQ86YW9 2145 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 TMEM269A0A1B0GVZ9 245 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 OR5B21A6NL26 309 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.86□□□□□ -1.15
USP53-207ENST00000510852 TMEM178BH3BS89 294 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 IGHA1P01876 353 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 CTSDP07339 412 aaPredicted RBP7.86□□□□□ -1.15
USP53-207ENST00000510852 RPS27P42677 84 aaKnown RBP7.86□□□□□ -1.15
USP53-207ENST00000510852 MEF2BQ02080 365 aaPredicted RBP7.86□□□□□ -1.15
USP53-207ENST00000510852 CEACAM16Q2WEN9 425 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 LRRC37A5PQ49AS3 106 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 FOXL2NBQ6ZUU3 175 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 STARD4Q96DR4 205 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 C1QTNF6Q9BXI9 259 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 TMEM222Q9H0R3 208 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 ZFYVE26Q68DK2 2539 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 LALBAP00709 142 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 ZNF823P16415 610 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 GUCA1AP43080 201 aaPredicted RBP7.86□□□□□ -1.15
USP53-207ENST00000510852 CA7P43166 264 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 GNG4P50150 75 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 GLYATL3Q5SZD4 288 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 RASL11AQ6T310 242 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 TBX15Q96SF7 602 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 OR2H1Q9GZK4 316 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 PROCRQ9UNN8 238 aa7.86□□□□□ -1.15
USP53-207ENST00000510852 DOCK7Q96N67 2140 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 RELNP78509 3460 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms