RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 NSG2Q9Y328 171 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 CSMD3Q7Z407 3707 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 DBX1A6NMT0 343 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 SERPINE2P07093 398 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 OR13C7P0DN81 318 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 ZNF182P17025 639 aaPredicted RBP13.52□□□□□ -0.25
TPM3-220ENST00000509601 RCVRNP35243 200 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 MFAP2P55001 183 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 UCP3P55916 312 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 ERVK-16P61578 105 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 LPCAT3Q6P1A2 487 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 GTSCR1Q86UQ5 136 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 ZC4H2Q9NQZ6 224 aa13.52□□□□□ -0.25
TPM3-220ENST00000509601 TECRQ9NZ01 308 aaKnown RBP13.52□□□□□ -0.25
TPM3-220ENST00000509601 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 TMEM213A2RRL7 107 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 CD7P09564 240 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 THOC7Q6I9Y2 204 aaKnown RBP13.51□□□□□ -0.25
TPM3-220ENST00000509601 MZT2AQ6P582 158 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 TBC1D26Q86UD7 250 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 GDPD1Q8N9F7 314 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
TPM3-220ENST00000509601 KLK11Q9UBX7 282 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 OR51B2Q9Y5P1 312 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 SELENOKQ9Y6D0 94 aa13.51□□□□□ -0.25
TPM3-220ENST00000509601 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 M0QYG6 137 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 ALDH3B2P48448 385 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 CD81P60033 236 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 TM4SF20Q53R12 229 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 UNQ9165/PRO28630Q6UXU0 137 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 HSD17B13Q7Z5P4 300 aaPredicted RBP13.5□□□□□ -0.25
TPM3-220ENST00000509601 LAX1Q8IWV1 398 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 MUC7Q8TAX7 377 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 WDR89Q96FK6 387 aaPredicted RBP13.5□□□□□ -0.25
TPM3-220ENST00000509601 SEC22AQ96IW7 307 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 CITED4Q96RK1 184 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 ABHD1Q96SE0 405 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 THYN1Q9P016 225 aa13.5□□□□□ -0.25
TPM3-220ENST00000509601 A8MWP6 167 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 SNAPC5O75971 98 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 GPR183P32249 361 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 EXTL2Q9UBQ6 330 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 MLXQ9UH92 298 aa13.49□□□□□ -0.25
TPM3-220ENST00000509601 F11RQ9Y624 299 aaKnown RBP13.49□□□□□ -0.25
TPM3-220ENST00000509601 IGHV3-35A0A0C4DH35 117 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 TPPPO94811 219 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 RNASE12Q5GAN4 147 aaKnown RBP13.48□□□□□ -0.25
TPM3-220ENST00000509601 CASC10Q5T4H9 136 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 LHFPL1Q86WI0 220 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 AP3S1Q92572 193 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 LSM10Q969L4 123 aaKnown RBP13.48□□□□□ -0.25
TPM3-220ENST00000509601 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
TPM3-220ENST00000509601 MIXL1Q9H2W2 232 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 SLC2A8Q9NY64 477 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 FKBP11Q9NYL4 201 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 PRNDQ9UKY0 176 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 PLECQ15149 4684 aaKnown RBP13.48□□□□□ -0.25
TPM3-220ENST00000509601 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
TPM3-220ENST00000509601 LYSTQ99698 3801 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 F8W735 103 aaPredicted RBP13.47□□□□□ -0.25
TPM3-220ENST00000509601 TGOLN2O43493 480 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 CD3DP04234 171 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 GUCA2BQ16661 112 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 ZNF57Q68EA5 555 aaPredicted RBP13.47□□□□□ -0.25
TPM3-220ENST00000509601 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 TSC22D3Q99576 134 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
TPM3-220ENST00000509601 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
TPM3-220ENST00000509601 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
TPM3-220ENST00000509601 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
TPM3-220ENST00000509601 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 K7EIM0 57 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 CTDSP2O14595 271 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms