RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 HOXA5P20719 270 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 NPY1RP25929 384 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 LOXP28300 417 aaPredicted RBP9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 ZNF672Q499Z4 452 aaPredicted RBP9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 MUC15Q8N387 334 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 Q8N7P7 452 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 SLC24A4Q8NFF2 622 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 CCL17Q92583 94 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 NPVFQ9HCQ7 196 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 ICE1Q9Y2F5 2266 aa9.46□□□□□ -0.9
PRPF40B-203ENST00000508736 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 FNDC10F2Z333 226 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 SIAH2O43255 324 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 CLN5O75503 358 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 GRNP28799 593 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 S100A2P29034 98 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 CDX1P47902 265 aaPredicted RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 GNG10P50151 68 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 NDUFA6P56556 154 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 SLC25A48Q6ZT89 311 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 ZNF383Q8NA42 475 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 NANPQ8TBE9 248 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 DOK5Q9P104 306 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIVEP3Q5T1R4 2406 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 NDUFB3O43676 98 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 CXorf1O96002 111 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 PLAUP00749 431 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 TRGC2P03986 189 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 NDUFB7P17568 137 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 PPOXP50336 477 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 TEPPQ6URK8 271 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 SLC16A13Q7RTY0 426 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 ABHD12Q8N2K0 398 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 MGST2Q99735 147 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 FKBP11Q9NYL4 201 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 OR51B2Q9Y5P1 312 aa9.45□□□□□ -0.9
PRPF40B-203ENST00000508736 YLPM1P49750 1951 aaKnown RBP9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 RPL31P62899 125 aaKnown RBP9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 CDSNQ15517 529 aa9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 PLEKHA3Q9HB20 300 aa9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 SLC35D1Q9NTN3 355 aa9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 LSM4Q9Y4Z0 139 aaKnown RBP9.44□□□□□ -0.9
PRPF40B-203ENST00000508736 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 YIF1AO95070 293 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 MT-CO2P00403 227 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 APOA2P02652 100 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 GALR1P47211 349 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 RHOBP62745 196 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 CST9LP1Q5W188 147 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 ZNF714Q96N38 554 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 SSX3Q99909 188 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 GAR1Q9NY12 217 aaKnown RBP9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 FLNCQ14315 2725 aa9.43□□□□□ -0.9
PRPF40B-203ENST00000508736 UPK2O00526 184 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 FCN3O75636 299 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 CD99P14209 185 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 B2MP61769 119 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 MIC13Q5XKP0 118 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 TMEM170AQ8WVE7 144 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 ITLN2Q8WWU7 325 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 HINT2Q9BX68 163 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 SRD5A3Q9H8P0 318 aa9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 PATZ1Q9HBE1 687 aaKnown RBP9.42□□□□□ -0.9
PRPF40B-203ENST00000508736 ROS1P08922 2347 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms