RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 DGCR14Q96DF8 476 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 IMMP2LQ96T52 175 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 KLF6Q99612 283 aaPredicted RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 NIPSNAP1Q9BPW8 284 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 CMSS1Q9BQ75 279 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 TMEM147Q9BVK8 224 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 ULBP3Q9BZM4 244 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TRIM4Q9C037 500 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 C20orf27Q9GZN8 174 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 RNASE7Q9H1E1 156 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 NDUFB11Q9NX14 153 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TP73-AS1Q9UF72 201 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 HHLA3Q9XRX5 114 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 ARL2BPQ9Y2Y0 163 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TIMM22Q9Y584 194 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TTC21AQ8NDW8 1320 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 COL5A1P20908 1838 aaPredicted RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 EIF3AQ14152 1382 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 RALGAPA2Q2PPJ7 1873 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 DENND4BO75064 1496 aaPredicted RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 TRPM6Q9BX84 2022 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 MAST2Q6P0Q8 1798 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 IGHV3-64A0A075B6Q5 118 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 TRGV4A0A0C4DH28 118 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 A0A0G2JQZ4 141 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 EXOC1LA0A1B0GW35 172 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 DPRXA6NFQ7 191 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 H3BT86 120 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 J3QRE1 110 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 KLRC4O43908 158 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 PDE6DO43924 150 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 OR7C1O76099 320 aaPredicted RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 ZNF682O95780 498 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 IGHV3-7P01780 117 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 SERPINA7P05543 415 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 MSMBP08118 114 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 SMIM10L2AP0DMW4 78 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 SMIM10L2BP0DMW5 78 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BOP23527 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 PSMB8P28062 276 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HLA-DMBP28068 263 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 S100A5P33763 92 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BBP33778 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 CCR2P41597 374 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 EMP1P54849 157 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BDP58876 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H4AP62805 103 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BCP62807 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 RPL18Q07020 188 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 SPA17Q15506 151 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 TAF1AQ15573 450 aaPredicted RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST2H2BEQ16778 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 C12orf74Q32Q52 190 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 ZNF791Q3KP31 576 aaPredicted RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 LIN52Q52LA3 116 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 IBA57Q5T440 356 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 AADACL3Q5VUY0 350 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 TEX36Q5VZQ5 186 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 S100A7AQ86SG5 101 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 OOSP2Q86WS3 158 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 GDPD1Q8N9F7 314 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 PXT1Q8NFP0 134 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 OR51A2Q8NGJ7 313 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 OR10X1Q8NGY0 326 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 CT55Q8WUE5 264 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BHQ93079 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 TOMM6Q96B49 74 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 MRPS24Q96EL2 167 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 SIGMAR1Q99720 223 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BNQ99877 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 HIST1H2BMQ99879 126 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 DERL1Q9BUN8 251 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 COMMD5Q9GZQ3 224 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 C11orf68Q9H3H3 251 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 C14orf105Q9NVL8 296 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 SAMHD1Q9Y3Z3 626 aaKnown RBP0.81□□□□□ -2.28
SMN2-208ENST00000508258 ARL5AQ9Y689 179 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 VWDEQ8N2E2 1590 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 ZNF532Q9HCE3 1301 aa0.81□□□□□ -2.28
SMN2-208ENST00000508258 STRCP1A6NGW2 1772 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 SCAF11Q99590 1463 aaKnown RBP0.8□□□□□ -2.28
SMN2-208ENST00000508258 TOPBP1Q92547 1522 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 PTPRSQ13332 1948 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 SCN9AQ15858 1988 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 SMARCA4P51532 1647 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 TMSB15BA0A087X1C1 80 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 TRAV41A0A0B4J266 112 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 IGHV1-18A0A0C4DH31 117 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 IRGMA1A4Y4 181 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 GGT3PA6NGU5 568 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 SIGLEC16A6NMB1 481 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 FABP5P3A8MUU1 101 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 FNDC10F2Z333 226 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 TRAPPC2LH3BP13 241 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 H7C2G1 150 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 PIRO00625 290 aa0.8□□□□□ -2.28
SMN2-208ENST00000508258 CREBL2O60519 120 aaPredicted RBP0.8□□□□□ -2.28
SMN2-208ENST00000508258 OR2B3O76000 313 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms